Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RIPK2O43353 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RIPK2O43353 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RIPK2O43353 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.19■□□□□ 0.98
RIPK2O43353 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.18■□□□□ 0.98
RIPK2O43353 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.18■□□□□ 0.98
RIPK2O43353 SLC47A1P1-202ENST00000449666 945 ntBASIC21.18■□□□□ 0.98
RIPK2O43353 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.18■□□□□ 0.98
RIPK2O43353 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RIPK2O43353 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.18■□□□□ 0.98
RIPK2O43353 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RIPK2O43353 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.18■□□□□ 0.98
RIPK2O43353 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIPK2O43353 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.17■□□□□ 0.98
RIPK2O43353 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIPK2O43353 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.17■□□□□ 0.98
RIPK2O43353 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RIPK2O43353 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIPK2O43353 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RIPK2O43353 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIPK2O43353 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RIPK2O43353 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIPK2O43353 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.17■□□□□ 0.98
RIPK2O43353 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIPK2O43353 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIPK2O43353 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIPK2O43353 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.17■□□□□ 0.98
RIPK2O43353 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.16■□□□□ 0.98
RIPK2O43353 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RIPK2O43353 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RIPK2O43353 SERBP1P1-201ENST00000396021 1160 ntBASIC21.16■□□□□ 0.98
RIPK2O43353 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.16■□□□□ 0.98
RIPK2O43353 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIPK2O43353 AL138724.1-201ENST00000606771 1088 ntBASIC21.16■□□□□ 0.98
RIPK2O43353 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIPK2O43353 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIPK2O43353 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIPK2O43353 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RIPK2O43353 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RIPK2O43353 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RIPK2O43353 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.15■□□□□ 0.98
RIPK2O43353 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.15■□□□□ 0.98
RIPK2O43353 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIPK2O43353 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIPK2O43353 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIPK2O43353 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.15■□□□□ 0.98
RIPK2O43353 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RIPK2O43353 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RIPK2O43353 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.15■□□□□ 0.98
RIPK2O43353 AL512631.2-201ENST00000604634 923 ntBASIC21.15■□□□□ 0.98
RIPK2O43353 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIPK2O43353 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RIPK2O43353 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIPK2O43353 FP700111.2-201ENST00000619190 1892 ntBASIC21.15■□□□□ 0.98
RIPK2O43353 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.15■□□□□ 0.98
RIPK2O43353 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RIPK2O43353 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIPK2O43353 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIPK2O43353 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RIPK2O43353 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.14■□□□□ 0.97
RIPK2O43353 SMUG1P1-201ENST00000590640 811 ntBASIC21.14■□□□□ 0.97
RIPK2O43353 AC136469.2-201ENST00000623944 1028 ntBASIC21.14■□□□□ 0.97
RIPK2O43353 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RIPK2O43353 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIPK2O43353 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIPK2O43353 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIPK2O43353 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RIPK2O43353 AC099778.1-201ENST00000568593 1911 ntBASIC21.14■□□□□ 0.97
RIPK2O43353 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIPK2O43353 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIPK2O43353 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIPK2O43353 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.13■□□□□ 0.97
RIPK2O43353 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIPK2O43353 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIPK2O43353 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIPK2O43353 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RIPK2O43353 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.13■□□□□ 0.97
RIPK2O43353 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.13■□□□□ 0.97
RIPK2O43353 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RIPK2O43353 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIPK2O43353 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIPK2O43353 SYT6-210ENST00000641643 1587 ntBASIC21.13■□□□□ 0.97
RIPK2O43353 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RIPK2O43353 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIPK2O43353 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIPK2O43353 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms