Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PHF1O43189 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.94■□□□□ 0.46
PHF1O43189 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHF1O43189 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.94■□□□□ 0.46
PHF1O43189 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHF1O43189 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PHF1O43189 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHF1O43189 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PHF1O43189 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PHF1O43189 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PHF1O43189 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHF1O43189 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHF1O43189 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.93■□□□□ 0.46
PHF1O43189 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PHF1O43189 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHF1O43189 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHF1O43189 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.93■□□□□ 0.46
PHF1O43189 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.93■□□□□ 0.46
PHF1O43189 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PHF1O43189 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHF1O43189 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.93■□□□□ 0.46
PHF1O43189 AC079089.2-201ENST00000531211 1277 ntBASIC17.93■□□□□ 0.46
PHF1O43189 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PHF1O43189 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PHF1O43189 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHF1O43189 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PHF1O43189 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.93■□□□□ 0.46
PHF1O43189 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.92■□□□□ 0.46
PHF1O43189 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PHF1O43189 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.92■□□□□ 0.46
PHF1O43189 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.92■□□□□ 0.46
PHF1O43189 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.92■□□□□ 0.46
PHF1O43189 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
PHF1O43189 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PHF1O43189 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PHF1O43189 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
PHF1O43189 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PHF1O43189 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHF1O43189 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHF1O43189 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHF1O43189 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PHF1O43189 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PHF1O43189 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHF1O43189 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.91■□□□□ 0.46
PHF1O43189 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.91■□□□□ 0.46
PHF1O43189 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PHF1O43189 AC093827.2-201ENST00000512654 315 ntBASIC17.91■□□□□ 0.46
PHF1O43189 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.91■□□□□ 0.46
PHF1O43189 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.91■□□□□ 0.46
PHF1O43189 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHF1O43189 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHF1O43189 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHF1O43189 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHF1O43189 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHF1O43189 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHF1O43189 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.9■□□□□ 0.46
PHF1O43189 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PHF1O43189 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.9■□□□□ 0.46
PHF1O43189 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.9■□□□□ 0.46
PHF1O43189 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHF1O43189 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHF1O43189 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.9■□□□□ 0.46
PHF1O43189 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.9■□□□□ 0.46
PHF1O43189 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHF1O43189 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHF1O43189 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHF1O43189 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.9■□□□□ 0.46
PHF1O43189 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.9■□□□□ 0.46
PHF1O43189 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
PHF1O43189 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.9■□□□□ 0.46
PHF1O43189 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.9■□□□□ 0.46
PHF1O43189 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHF1O43189 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHF1O43189 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.9■□□□□ 0.46
PHF1O43189 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHF1O43189 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
PHF1O43189 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.89■□□□□ 0.45
PHF1O43189 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHF1O43189 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHF1O43189 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHF1O43189 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PHF1O43189 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PHF1O43189 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PHF1O43189 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PHF1O43189 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHF1O43189 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHF1O43189 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHF1O43189 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms