Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC188H7C350 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC188H7C350 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC188H7C350 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC188H7C350 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC188H7C350 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC188H7C350 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.67■■□□□ 1.06
CCDC188H7C350 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
CCDC188H7C350 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC188H7C350 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC188H7C350 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC188H7C350 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC188H7C350 AL162377.1-201ENST00000618844 1793 ntBASIC21.66■■□□□ 1.06
CCDC188H7C350 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC188H7C350 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC188H7C350 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC188H7C350 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC188H7C350 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC188H7C350 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC188H7C350 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC188H7C350 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC188H7C350 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC188H7C350 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC188H7C350 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC188H7C350 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC188H7C350 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC188H7C350 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
CCDC188H7C350 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC188H7C350 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.66■■□□□ 1.06
CCDC188H7C350 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC188H7C350 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC188H7C350 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC188H7C350 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC188H7C350 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC188H7C350 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC188H7C350 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC188H7C350 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC188H7C350 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC188H7C350 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC188H7C350 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CCDC188H7C350 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC188H7C350 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC188H7C350 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC188H7C350 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC188H7C350 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC188H7C350 AFG3L1P-217ENST00000557444 2447 ntBASIC21.64■■□□□ 1.05
CCDC188H7C350 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC188H7C350 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC188H7C350 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC188H7C350 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.64■■□□□ 1.05
CCDC188H7C350 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC188H7C350 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CCDC188H7C350 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC188H7C350 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CCDC188H7C350 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC188H7C350 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC188H7C350 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC188H7C350 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC188H7C350 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC188H7C350 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC188H7C350 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC188H7C350 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.63■■□□□ 1.05
CCDC188H7C350 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC188H7C350 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC188H7C350 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC188H7C350 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC188H7C350 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC188H7C350 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC188H7C350 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC188H7C350 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCDC188H7C350 AC009237.3-201ENST00000393279 1427 ntBASIC21.63■■□□□ 1.05
CCDC188H7C350 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC188H7C350 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCDC188H7C350 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCDC188H7C350 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC188H7C350 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC188H7C350 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC188H7C350 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC188H7C350 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC188H7C350 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC188H7C350 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CCDC188H7C350 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CCDC188H7C350 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC188H7C350 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC188H7C350 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC188H7C350 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC188H7C350 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC188H7C350 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC188H7C350 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC188H7C350 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCDC188H7C350 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CCDC188H7C350 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC188H7C350 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC188H7C350 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCDC188H7C350 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC188H7C350 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC188H7C350 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCDC188H7C350 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC188H7C350 GUSBP5-201ENST00000418136 578 ntBASIC21.61■■□□□ 1.05
CCDC188H7C350 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms