Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LINC00473A8K010 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC00473A8K010 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00473A8K010 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 AC073314.1-201ENST00000568729 2216 ntBASIC16.97■□□□□ 0.31
LINC00473A8K010 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 SUDS3P1-201ENST00000505831 966 ntBASIC16.97■□□□□ 0.31
LINC00473A8K010 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LINC00473A8K010 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LINC00473A8K010 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LINC00473A8K010 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00473A8K010 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LINC00473A8K010 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC00473A8K010 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00473A8K010 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC00473A8K010 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
LINC00473A8K010 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC00473A8K010 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LINC00473A8K010 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
LINC00473A8K010 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LINC00473A8K010 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00473A8K010 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00473A8K010 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00473A8K010 EEF1DP3-203ENST00000566025 782 ntBASIC16.96■□□□□ 0.31
LINC00473A8K010 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.96■□□□□ 0.31
LINC00473A8K010 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
LINC00473A8K010 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC00473A8K010 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC00473A8K010 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00473A8K010 AP005212.1-201ENST00000581547 1997 ntBASIC16.96■□□□□ 0.31
LINC00473A8K010 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00473A8K010 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00473A8K010 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC00473A8K010 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00473A8K010 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00473A8K010 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00473A8K010 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LINC00473A8K010 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.95■□□□□ 0.3
LINC00473A8K010 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00473A8K010 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00473A8K010 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00473A8K010 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00473A8K010 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00473A8K010 TPRG1LP1-201ENST00000598702 760 ntBASIC16.95■□□□□ 0.3
LINC00473A8K010 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.95■□□□□ 0.3
LINC00473A8K010 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00473A8K010 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LINC00473A8K010 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00473A8K010 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00473A8K010 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00473A8K010 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00473A8K010 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00473A8K010 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00473A8K010 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00473A8K010 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.94■□□□□ 0.3
LINC00473A8K010 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.94■□□□□ 0.3
LINC00473A8K010 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.94■□□□□ 0.3
LINC00473A8K010 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.94■□□□□ 0.3
LINC00473A8K010 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.94■□□□□ 0.3
LINC00473A8K010 AC053503.5-201ENST00000601508 636 ntBASIC16.94■□□□□ 0.3
LINC00473A8K010 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.94■□□□□ 0.3
LINC00473A8K010 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.94■□□□□ 0.3
LINC00473A8K010 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00473A8K010 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC00473A8K010 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00473A8K010 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00473A8K010 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00473A8K010 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00473A8K010 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00473A8K010 GABARAPL3-202ENST00000624044 1851 ntBASIC16.93■□□□□ 0.3
LINC00473A8K010 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00473A8K010 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00473A8K010 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00473A8K010 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00473A8K010 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.93■□□□□ 0.3
LINC00473A8K010 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LINC00473A8K010 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms