Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01549A6NIU2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01549A6NIU2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01549A6NIU2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01549A6NIU2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01549A6NIU2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01549A6NIU2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.81□□□□□ -0.04
LINC01549A6NIU2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01549A6NIU2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01549A6NIU2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC01549A6NIU2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LINC01549A6NIU2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01549A6NIU2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 AC020907.5-201ENST00000624372 1936 ntBASIC14.8□□□□□ -0.04
LINC01549A6NIU2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01549A6NIU2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC01549A6NIU2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 BHLHE23-202ENST00000612929 1109 ntBASIC14.78□□□□□ -0.04
LINC01549A6NIU2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01549A6NIU2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01549A6NIU2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01549A6NIU2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01549A6NIU2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01549A6NIU2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01549A6NIU2 SMG8-203ENST00000578922 2178 ntBASIC14.77□□□□□ -0.04
LINC01549A6NIU2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01549A6NIU2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01549A6NIU2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC01549A6NIU2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms