Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC160A6NGH7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC160A6NGH7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC160A6NGH7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC160A6NGH7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CCDC160A6NGH7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC160A6NGH7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CCDC160A6NGH7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC160A6NGH7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 AC093536.1-201ENST00000569153 554 ntBASIC19.39■□□□□ 0.69
CCDC160A6NGH7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC160A6NGH7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC160A6NGH7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC160A6NGH7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC160A6NGH7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC160A6NGH7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC160A6NGH7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC160A6NGH7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC160A6NGH7 AL049796.1-201ENST00000565336 1766 ntBASIC19.38■□□□□ 0.69
CCDC160A6NGH7 AC104564.3-201ENST00000582367 638 ntBASIC19.38■□□□□ 0.69
CCDC160A6NGH7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC160A6NGH7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC160A6NGH7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC160A6NGH7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC160A6NGH7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 AP000974.1-201ENST00000623909 2387 ntBASIC19.37■□□□□ 0.69
CCDC160A6NGH7 AC116562.4-201ENST00000641316 2276 ntBASIC19.37■□□□□ 0.69
CCDC160A6NGH7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC160A6NGH7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC160A6NGH7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC160A6NGH7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms