Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 UBE2DNL-204ENST00000602536 740 ntBASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC196A0A1B0GTZ2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 AL137060.1-201ENST00000618151 2648 ntBASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 MYCNOS-205ENST00000641950 531 ntBASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.25■■□□□ 1.47
CCDC196A0A1B0GTZ2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC196A0A1B0GTZ2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
CCDC196A0A1B0GTZ2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.23■■□□□ 1.47
CCDC196A0A1B0GTZ2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
CCDC196A0A1B0GTZ2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
CCDC196A0A1B0GTZ2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC196A0A1B0GTZ2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.23■■□□□ 1.47
CCDC196A0A1B0GTZ2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.23■■□□□ 1.47
CCDC196A0A1B0GTZ2 AC243732.1-201ENST00000612648 864 ntBASIC24.23■■□□□ 1.47
CCDC196A0A1B0GTZ2 RARRES2P11-201ENST00000635158 484 ntBASIC24.23■■□□□ 1.47
CCDC196A0A1B0GTZ2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC196A0A1B0GTZ2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC196A0A1B0GTZ2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC196A0A1B0GTZ2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 AC016769.1-201ENST00000409132 1010 ntBASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.22■■□□□ 1.47
CCDC196A0A1B0GTZ2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
CCDC196A0A1B0GTZ2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC196A0A1B0GTZ2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC196A0A1B0GTZ2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC196A0A1B0GTZ2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.21■■□□□ 1.47
CCDC196A0A1B0GTZ2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC196A0A1B0GTZ2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC196A0A1B0GTZ2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC196A0A1B0GTZ2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms