Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 SRD5A1P1-201ENST00000442297 786 ntBASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 AL356740.2-201ENST00000601559 647 ntBASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV27A0A0K0K1C4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 AC009299.2-201ENST00000482477 511 ntBASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 AL138724.1-201ENST00000606771 1088 ntBASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 PCDHAC2-203ENST00000615316 3011 ntBASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV27A0A0K0K1C4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV27A0A0K0K1C4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV27A0A0K0K1C4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV27A0A0K0K1C4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.71□□□□□ -0.06
TRBV27A0A0K0K1C4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV27A0A0K0K1C4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 KRT16P3-201ENST00000439127 1283 ntBASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms