Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 LINC01521-201ENST00000504184 1943 ntBASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 BCL2-203ENST00000589955 5011 ntBASIC14.53□□□□□ -0.08
TRAV8-4A0A0B4J246 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRAV8-4A0A0B4J246 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-4A0A0B4J246 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-4A0A0B4J246 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV8-4A0A0B4J246 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-4A0A0B4J246 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-4A0A0B4J246 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-4A0A0B4J246 AC026310.3-201ENST00000625186 2373 ntBASIC14.52□□□□□ -0.08
TRAV8-4A0A0B4J246 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-4A0A0B4J246 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV8-4A0A0B4J246 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRAV8-4A0A0B4J246 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 BX842568.3-201ENST00000418104 571 ntBASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 AC010525.1-201ENST00000585559 441 ntBASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-4A0A0B4J246 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 UNC93B3-201ENST00000308076 687 ntBASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 SLC47A1P1-202ENST00000449666 945 ntBASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-4A0A0B4J246 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-4A0A0B4J246 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV8-4A0A0B4J246 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-4A0A0B4J246 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV8-4A0A0B4J246 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
TRAV8-4A0A0B4J246 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV8-4A0A0B4J246 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-4A0A0B4J246 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms