Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV10A0A0B4J240 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 BX276092.2-201ENST00000417668 665 ntBASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 AC093787.1-201ENST00000450396 207 ntBASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 AC092118.2-201ENST00000613495 667 ntBASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV10A0A0B4J240 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV10A0A0B4J240 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.71□□□□□ -0.06
TRAV10A0A0B4J240 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
TRAV10A0A0B4J240 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV10A0A0B4J240 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV10A0A0B4J240 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 ABHD17AP1-201ENST00000358206 933 ntBASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 ME2-208ENST00000638937 2471 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV10A0A0B4J240 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 C9orf163-202ENST00000624034 2573 ntBASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 AC010542.4-201ENST00000563151 1910 ntBASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 AC242852.2-201ENST00000615738 1807 ntBASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV10A0A0B4J240 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 AC010980.2-201ENST00000587099 1412 ntBASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 FAM21FP-204ENST00000608637 956 ntBASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV10A0A0B4J240 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV10A0A0B4J240 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms