Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 AC004854.2-201ENST00000608450 1441 ntBASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRBV7-1A0A0A6YYK4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV7-1A0A0A6YYK4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 AC245052.3-201ENST00000450182 901 ntBASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV7-1A0A0A6YYK4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV7-1A0A0A6YYK4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 NTF6G-201ENST00000591094 616 ntBASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
TRBV7-1A0A0A6YYK4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.18
TRBV7-1A0A0A6YYK4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRBV7-1A0A0A6YYK4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms