Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 AL136116.3-201ENST00000402907 1138 ntBASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-2A0A087WT02 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-2A0A087WT02 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV9-2A0A087WT02 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 AC131281.2-201ENST00000520478 145 ntBASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 DUX4L19-201ENST00000557448 1267 ntBASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms