Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV30A0A087WSZ9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV30A0A087WSZ9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.33■□□□□ 0.21
TRAV30A0A087WSZ9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.33■□□□□ 0.21
TRAV30A0A087WSZ9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV30A0A087WSZ9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.33■□□□□ 0.21
TRAV30A0A087WSZ9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV30A0A087WSZ9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAV30A0A087WSZ9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV30A0A087WSZ9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV30A0A087WSZ9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV30A0A087WSZ9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV30A0A087WSZ9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV30A0A087WSZ9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRAV30A0A087WSZ9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRAV30A0A087WSZ9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV30A0A087WSZ9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
TRAV30A0A087WSZ9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV30A0A087WSZ9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV30A0A087WSZ9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV30A0A087WSZ9 AC007952.6-201ENST00000573168 2673 ntBASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 AC003957.1-201ENST00000625108 2673 ntBASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 AC091305.1-201ENST00000479476 895 ntBASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 AP001330.3-201ENST00000520123 633 ntBASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV30A0A087WSZ9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV30A0A087WSZ9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV30A0A087WSZ9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV30A0A087WSZ9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV30A0A087WSZ9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV30A0A087WSZ9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV30A0A087WSZ9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.3■□□□□ 0.2
TRAV30A0A087WSZ9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.3■□□□□ 0.2
TRAV30A0A087WSZ9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV30A0A087WSZ9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV30A0A087WSZ9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRAV30A0A087WSZ9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAV30A0A087WSZ9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 MIR939-201ENST00000401314 82 ntBASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms