Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 SNORA48-201ENST00000386847 135 ntBASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AC009494.1-201ENST00000406090 455 ntBASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AL023773.1-201ENST00000423985 1124 ntBASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 FAM133B-202ENST00000427372 931 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 RFC4-207ENST00000433496 1111 ntTSL 5 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AC006012.1-201ENST00000436600 691 ntTSL 2 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AL451062.1-201ENST00000437753 469 ntTSL 2 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AL669970.1-201ENST00000444936 450 ntTSL 2 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AL355537.1-201ENST00000446589 450 ntTSL 2 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 TSSK1A-201ENST00000450724 768 ntBASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AL390763.1-201ENST00000454492 346 ntTSL 2 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 RN7SL762P-201ENST00000469864 289 ntBASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 MTHFD2P1-202ENST00000489784 871 ntBASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AC008897.2-201ENST00000501886 527 ntTSL 4 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 LINC02505-201ENST00000505298 788 ntTSL 5 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AC100861.2-201ENST00000511929 1125 ntTSL 3 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AC022568.1-201ENST00000518222 833 ntTSL 4 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AP003385.4-201ENST00000524977 324 ntBASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 LINC02327-206ENST00000551588 885 ntTSL 5 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 OR7E106P-201ENST00000556941 1021 ntBASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 MIR4419A-201ENST00000583845 77 ntBASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 ZNF268-218ENST00000592241 686 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 AC084879.1-201ENST00000636165 1201 ntBASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 OR6K6-202ENST00000641861 1172 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 PDYN-202ENST00000539905 2725 ntAPPRIS P1 TSL 4 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 NIF3L1-204ENST00000409357 1679 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 PCDHGA1-201ENST00000378105 4069 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 FANCF-201ENST00000327470 4269 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 MIR100HG-223ENST00000636654 1434 ntTSL 5 BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 ZMAT2-201ENST00000274712 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SYCE2Q6PIF2 Z98259.3-202ENST00000641860 2210 ntBASIC10.65□□□□□ -0.71
SYCE2Q6PIF2 RCC1-203ENST00000373833 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SYCE2Q6PIF2 APPL2-213ENST00000551662 2190 ntTSL 2 BASIC10.65□□□□□ -0.71
SYCE2Q6PIF2 CD36-208ENST00000433696 1985 ntTSL 5 BASIC10.65□□□□□ -0.71
SYCE2Q6PIF2 FOXL2NB-201ENST00000383165 3538 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AL133216.2-201ENST00000622550 7213 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 TTC17-201ENST00000039989 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 ZNF565-202ENST00000355114 2519 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 ZNF700-201ENST00000254321 2882 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 ITIH4-202ENST00000406595 2872 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 NT5C1B-201ENST00000304081 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 TSNAXIP1-206ENST00000561639 2258 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 IL1RAPL1-201ENST00000302196 1314 ntTSL 5 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 MX2-201ENST00000330714 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AC068790.9-201ENST00000621669 2838 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 UHRF1-201ENST00000612630 4309 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 ZNF691-204ENST00000372506 1859 ntAPPRIS P3 TSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 LINC01539-205ENST00000591974 1884 ntTSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 HNRNPH2-201ENST00000316594 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 CTSE-201ENST00000358184 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 SLC4A1-202ENST00000399246 3855 ntTSL 5 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 HIST1H2AA-201ENST00000297012 396 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 OR1L6-201ENST00000304720 1020 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 BPIFA1-201ENST00000354297 1079 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 MYOF-203ENST00000371488 763 ntTSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 TMEM254-203ENST00000372275 860 ntTSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 BPHL-202ENST00000380375 1050 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 SMYD3-IT1-201ENST00000426929 361 ntTSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 LINC01715-202ENST00000427804 688 ntTSL 5 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 SNRPCP1-201ENST00000433292 458 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AC009365.1-201ENST00000436379 751 ntTSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 FERP1-201ENST00000436391 793 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 ACA64.3-201ENST00000459613 127 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 ST13P15-201ENST00000460666 1107 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 RN7SL253P-201ENST00000476759 296 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 RN7SL34P-201ENST00000497296 270 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AL162431.3-201ENST00000503142 537 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 TMEM92-202ENST00000507382 573 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AC098679.3-203ENST00000514881 919 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AC024451.2-201ENST00000519856 1108 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 RPL27A-204ENST00000526562 519 ntTSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AP002812.5-201ENST00000530972 712 ntTSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 WARSP1-201ENST00000533936 454 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AC003002.1-201ENST00000543226 732 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AL355916.3-201ENST00000556347 779 ntAPPRIS P1 TSL 4 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 LINC00511-204ENST00000577828 538 ntTSL 3 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AC024267.5-201ENST00000579154 599 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AC008760.1-201ENST00000594056 686 ntTSL 3 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AL391987.5-201ENST00000618472 412 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AC027575.4-201ENST00000622010 586 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AC007603.2-201ENST00000623281 506 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 RDM1-229ENST00000639942 420 ntTSL 5 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 AC126603.1-201ENST00000557586 2512 ntBASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 CFAP45-202ENST00000426543 1976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 RCBTB2-201ENST00000344532 3232 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 ZBTB37-204ENST00000427304 2300 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 KCTD21-AS1-201ENST00000500113 1789 ntTSL 2 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 SMYD1-201ENST00000419482 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 KIAA1191-213ENST00000620366 2452 ntTSL 3 BASIC10.64□□□□□ -0.71
SYCE2Q6PIF2 PAMR1-208ENST00000621476 2842 ntTSL 2 BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms