Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 COPS4-202ENST00000503682 1702 ntTSL 5 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 ZCCHC8-210ENST00000633063 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 CRYZ-205ENST00000417775 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 INPP4A-210ENST00000523221 2934 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 CHRNA1-201ENST00000261007 1980 ntTSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 SH3GL2-201ENST00000380607 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 RAPGEF6-209ENST00000510071 3107 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC141257.1-202ENST00000570288 2239 ntTSL 3 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 CES5A-204ENST00000520435 1948 ntTSL 5 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC113554.2-201ENST00000577647 4862 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AL354892.3-201ENST00000586101 1630 ntBASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 KIAA0040-203ENST00000545251 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 LINC01654-201ENST00000569711 2471 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 FAM157C-204ENST00000570230 2184 ntTSL 5 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 SNX20-201ENST00000300590 3304 ntTSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 COPZ1-201ENST00000262061 1897 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 NDUFB6-201ENST00000350021 666 ntTSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AGPAT4-202ENST00000366905 942 ntTSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 ST3GAL3-215ENST00000372367 644 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 IGHV4-61-201ENST00000390630 457 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 ARL4A-202ENST00000396662 1296 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 CAPSL-202ENST00000397367 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 RPS27A-202ENST00000402285 705 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 RN7SKP270-201ENST00000411297 312 ntBASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 OR55B1P-201ENST00000418718 1014 ntBASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AL034428.1-201ENST00000425939 1101 ntTSL 5 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC006455.1-201ENST00000426550 517 ntTSL 3 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 IMP3P1-201ENST00000427532 557 ntBASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC103563.3-201ENST00000428055 354 ntBASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 SOX2-OT-215ENST00000493521 1239 ntTSL 3 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC093789.1-201ENST00000494861 649 ntBASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC034154.1-202ENST00000518105 691 ntTSL 3 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC008438.2-201ENST00000520443 570 ntTSL 4 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 MOK-223ENST00000522534 796 ntTSL 3 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AP003548.1-202ENST00000522767 552 ntTSL 4 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 ST3GAL3-229ENST00000528371 599 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 ARMS2-201ENST00000528446 818 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AP003031.2-201ENST00000533945 573 ntTSL 4 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 TRHDE-AS1-204ENST00000550334 403 ntTSL 3 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AL049870.2-201ENST00000554389 693 ntTSL 3 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 PPP2R5C-212ENST00000554442 800 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC018563.1-201ENST00000558089 566 ntTSL 4 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC021818.1-201ENST00000561316 547 ntTSL 5 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC092120.2-201ENST00000567166 415 ntTSL 5 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 CIAPIN1-214ENST00000569979 896 ntTSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC006504.5-206ENST00000585917 719 ntTSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 KXD1-209ENST00000598830 932 ntTSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AL096814.1-201ENST00000623004 580 ntAPPRIS ALT2 TSL 3 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC096920.2-201ENST00000624711 339 ntTSL 4 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 LINC01002-203ENST00000631484 754 ntTSL 3 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 LINC01002-230ENST00000633592 568 ntTSL 5 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 DLG2-208ENST00000404783 1831 ntTSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 CUL9-202ENST00000372647 7684 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 DYNC1I2-205ENST00000409453 2552 ntTSL 5 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 C1orf220-202ENST00000521244 2577 ntTSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 CFAP97-202ENST00000458385 4852 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 LRRTM4-204ENST00000409884 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 PLAGL1-204ENST00000367572 2496 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 PDYN-202ENST00000539905 2725 ntAPPRIS P1 TSL 4 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AL031590.1-203ENST00000642075 2747 ntBASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AKAP13-221ENST00000560579 4290 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 FCRLA-209ENST00000367957 1684 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 LINC02368-201ENST00000541258 1656 ntTSL 2 BASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 AC008074.3-201ENST00000561559 1907 ntBASIC9.39□□□□□ -0.91
NPIPA3F8WFD2 TCHP-201ENST00000312777 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 BROX-207ENST00000537020 3670 ntTSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 TRERF1-203ENST00000372917 3914 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 NFIB-206ENST00000397575 2869 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 LAMC2-204ENST00000493293 4313 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 MAGEB3-201ENST00000361644 2305 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 IDO1-202ENST00000518237 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 LARS2-203ENST00000415258 4744 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 EPHB1-211ENST00000493838 2786 ntTSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 SEC23B-203ENST00000377465 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 PLEKHM3-204ENST00000457206 3689 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 WWP2-213ENST00000568684 3672 ntTSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 ZNF491-201ENST00000323169 2471 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 KCNE1B-202ENST00000618699 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 RAD17-204ENST00000354312 2943 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 AC004990.1-202ENST00000454234 1965 ntTSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 SAA2-201ENST00000256733 563 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 CLEC4C-202ENST00000360345 970 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 CA5BP1-204ENST00000380336 843 ntTSL 5 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 TRBV5-6-201ENST00000390375 384 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 KRT18P19-201ENST00000395181 705 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 TSPAN9-202ENST00000407263 956 ntTSL 5 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 ANKRD61-201ENST00000409061 1257 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 AL162431.1-202ENST00000422858 444 ntTSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 HMGN1P38-201ENST00000431116 303 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 AL731897.1-201ENST00000433546 396 ntTSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 1504.7 ms