Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 DUX4L4-201ENST00000566884 1269 ntBASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 TNXA-203ENST00000507684 2038 ntBASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 AC239859.2-201ENST00000444165 318 ntBASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 AC009299.2-201ENST00000482477 511 ntBASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 AC009086.3-201ENST00000623486 1008 ntBASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.55■□□□□ 0.72
COMMD3-BMI1R4GMX3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD3-BMI1R4GMX3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 TSPY9P-201ENST00000440215 945 ntBASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 TSPY11P-201ENST00000442607 1045 ntBASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 AL451085.2-201ENST00000605085 799 ntBASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 AC010997.5-201ENST00000609182 354 ntBASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD3-BMI1R4GMX3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 OXCT2P1-201ENST00000447263 1535 ntBASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD3-BMI1R4GMX3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COMMD3-BMI1R4GMX3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
COMMD3-BMI1R4GMX3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COMMD3-BMI1R4GMX3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms