Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC6Q9Y625 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GPC6Q9Y625 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC6Q9Y625 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.68■□□□□ 0.74
GPC6Q9Y625 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GPC6Q9Y625 SMUG1P1-201ENST00000590640 811 ntBASIC19.68■□□□□ 0.74
GPC6Q9Y625 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
GPC6Q9Y625 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GPC6Q9Y625 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.68■□□□□ 0.74
GPC6Q9Y625 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC6Q9Y625 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC6Q9Y625 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC6Q9Y625 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC6Q9Y625 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
GPC6Q9Y625 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
GPC6Q9Y625 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.68■□□□□ 0.74
GPC6Q9Y625 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.68■□□□□ 0.74
GPC6Q9Y625 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
GPC6Q9Y625 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GPC6Q9Y625 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC6Q9Y625 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GPC6Q9Y625 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC6Q9Y625 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC6Q9Y625 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC6Q9Y625 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC6Q9Y625 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GPC6Q9Y625 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.67■□□□□ 0.74
GPC6Q9Y625 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.67■□□□□ 0.74
GPC6Q9Y625 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.67■□□□□ 0.74
GPC6Q9Y625 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
GPC6Q9Y625 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.67■□□□□ 0.74
GPC6Q9Y625 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.67■□□□□ 0.74
GPC6Q9Y625 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC6Q9Y625 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
GPC6Q9Y625 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.67■□□□□ 0.74
GPC6Q9Y625 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
GPC6Q9Y625 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.67■□□□□ 0.74
GPC6Q9Y625 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC6Q9Y625 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC6Q9Y625 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC6Q9Y625 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC6Q9Y625 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC6Q9Y625 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC6Q9Y625 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.66■□□□□ 0.74
GPC6Q9Y625 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC6Q9Y625 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC6Q9Y625 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.66■□□□□ 0.74
GPC6Q9Y625 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC6Q9Y625 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GPC6Q9Y625 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GPC6Q9Y625 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC6Q9Y625 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC6Q9Y625 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC6Q9Y625 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
GPC6Q9Y625 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
GPC6Q9Y625 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
GPC6Q9Y625 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC6Q9Y625 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.65■□□□□ 0.74
GPC6Q9Y625 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC6Q9Y625 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.65■□□□□ 0.74
GPC6Q9Y625 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.65■□□□□ 0.74
GPC6Q9Y625 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.65■□□□□ 0.74
GPC6Q9Y625 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
GPC6Q9Y625 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.65■□□□□ 0.74
GPC6Q9Y625 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC6Q9Y625 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GPC6Q9Y625 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GPC6Q9Y625 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC6Q9Y625 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GPC6Q9Y625 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.65■□□□□ 0.74
GPC6Q9Y625 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC6Q9Y625 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GPC6Q9Y625 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
GPC6Q9Y625 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GPC6Q9Y625 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
GPC6Q9Y625 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC6Q9Y625 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC6Q9Y625 MIR572-201ENST00000384983 95 ntBASIC19.64■□□□□ 0.73
GPC6Q9Y625 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GPC6Q9Y625 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.64■□□□□ 0.73
GPC6Q9Y625 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.64■□□□□ 0.73
GPC6Q9Y625 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.64■□□□□ 0.73
GPC6Q9Y625 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC6Q9Y625 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC6Q9Y625 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC6Q9Y625 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.64■□□□□ 0.73
GPC6Q9Y625 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
GPC6Q9Y625 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GPC6Q9Y625 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.63■□□□□ 0.73
GPC6Q9Y625 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GPC6Q9Y625 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
GPC6Q9Y625 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC6Q9Y625 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC6Q9Y625 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
GPC6Q9Y625 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC6Q9Y625 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.63■□□□□ 0.73
GPC6Q9Y625 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.63■□□□□ 0.73
GPC6Q9Y625 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC6Q9Y625 AC105265.2-201ENST00000467189 838 ntBASIC19.63■□□□□ 0.73
GPC6Q9Y625 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms