Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 BX323043.1-201ENST00000641006 1765 ntBASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGB1Q9Y5G3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 SMG8-203ENST00000578922 2178 ntBASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 UNC93B8-201ENST00000511903 705 ntBASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB1Q9Y5G3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGB1Q9Y5G3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHGB1Q9Y5G3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB1Q9Y5G3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB1Q9Y5G3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHGB1Q9Y5G3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PCDHGB1Q9Y5G3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB1Q9Y5G3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB1Q9Y5G3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB1Q9Y5G3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGB1Q9Y5G3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHGB1Q9Y5G3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHGB1Q9Y5G3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGB1Q9Y5G3 AC010997.5-201ENST00000609182 354 ntBASIC19.08■□□□□ 0.64
PCDHGB1Q9Y5G3 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGB1Q9Y5G3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB1Q9Y5G3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGB1Q9Y5G3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGB1Q9Y5G3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 PLK5-205ENST00000642079 1969 ntBASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 AC087289.5-201ENST00000586076 3175 ntBASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGB1Q9Y5G3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 AC027702.1-201ENST00000563810 1770 ntBASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB1Q9Y5G3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms