Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 AC083906.2-201ENST00000511578 360 ntBASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 EEF1DP3-203ENST00000566025 782 ntBASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 AC053503.5-201ENST00000601508 636 ntBASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 SLC29A4P1-201ENST00000398760 971 ntBASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB11Q9Y5F2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 AC005181.1-201ENST00000604782 1256 ntBASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCDHB11Q9Y5F2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 AP001160.3-201ENST00000601484 763 ntBASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 AC244015.2-201ENST00000616358 1861 ntBASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB11Q9Y5F2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 AC142086.2-201ENST00000569753 217 ntBASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB11Q9Y5F2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 PKD1P6-201ENST00000343738 4769 ntBASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 TSPY6P-201ENST00000448518 926 ntBASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 UBE2DNL-204ENST00000602536 740 ntBASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms