Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC32.5■■■□□ 2.79
CDK11AQ9UQ88 USP36-216ENST00000589424 970 ntTSL 5 BASIC32.5■■■□□ 2.79
CDK11AQ9UQ88 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
CDK11AQ9UQ88 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CDK11AQ9UQ88 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
CDK11AQ9UQ88 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CDK11AQ9UQ88 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CDK11AQ9UQ88 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC32.49■■■□□ 2.79
CDK11AQ9UQ88 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC32.49■■■□□ 2.79
CDK11AQ9UQ88 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
CDK11AQ9UQ88 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC32.48■■■□□ 2.79
CDK11AQ9UQ88 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC32.48■■■□□ 2.79
CDK11AQ9UQ88 KRT18P68-201ENST00000392293 1000 ntBASIC32.48■■■□□ 2.79
CDK11AQ9UQ88 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
CDK11AQ9UQ88 AC008550.1-201ENST00000511500 884 ntBASIC32.48■■■□□ 2.79
CDK11AQ9UQ88 AL359736.2-201ENST00000621992 437 ntBASIC32.48■■■□□ 2.79
CDK11AQ9UQ88 C11orf96-202ENST00000528572 1834 ntBASIC32.48■■■□□ 2.79
CDK11AQ9UQ88 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC32.48■■■□□ 2.79
CDK11AQ9UQ88 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CDK11AQ9UQ88 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC32.47■■■□□ 2.79
CDK11AQ9UQ88 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
CDK11AQ9UQ88 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC32.47■■■□□ 2.79
CDK11AQ9UQ88 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
CDK11AQ9UQ88 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CDK11AQ9UQ88 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CDK11AQ9UQ88 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CDK11AQ9UQ88 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC32.47■■■□□ 2.79
CDK11AQ9UQ88 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC32.47■■■□□ 2.79
CDK11AQ9UQ88 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CDK11AQ9UQ88 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
CDK11AQ9UQ88 PNMA6B-201ENST00000538162 1200 ntBASIC32.46■■■□□ 2.79
CDK11AQ9UQ88 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC32.46■■■□□ 2.79
CDK11AQ9UQ88 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC32.46■■■□□ 2.79
CDK11AQ9UQ88 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
CDK11AQ9UQ88 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CDK11AQ9UQ88 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CDK11AQ9UQ88 GCK-205ENST00000437084 1385 ntTSL 5 BASIC32.45■■■□□ 2.79
CDK11AQ9UQ88 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
CDK11AQ9UQ88 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.79
CDK11AQ9UQ88 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC32.45■■■□□ 2.79
CDK11AQ9UQ88 PEX7-202ENST00000367756 680 ntTSL 3 BASIC32.45■■■□□ 2.79
CDK11AQ9UQ88 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
CDK11AQ9UQ88 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC32.45■■■□□ 2.79
CDK11AQ9UQ88 RHOD-202ENST00000532559 538 ntTSL 3 BASIC32.45■■■□□ 2.79
CDK11AQ9UQ88 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC32.45■■■□□ 2.79
CDK11AQ9UQ88 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
CDK11AQ9UQ88 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC32.44■■■□□ 2.78
CDK11AQ9UQ88 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CDK11AQ9UQ88 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC32.44■■■□□ 2.78
CDK11AQ9UQ88 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
CDK11AQ9UQ88 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC32.44■■■□□ 2.78
CDK11AQ9UQ88 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC32.44■■■□□ 2.78
CDK11AQ9UQ88 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC32.44■■■□□ 2.78
CDK11AQ9UQ88 AC007322.3-201ENST00000426526 701 ntBASIC32.44■■■□□ 2.78
CDK11AQ9UQ88 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC32.44■■■□□ 2.78
CDK11AQ9UQ88 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC32.44■■■□□ 2.78
CDK11AQ9UQ88 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CDK11AQ9UQ88 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CDK11AQ9UQ88 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 NARF-205ENST00000412079 1760 ntTSL 5 BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 AC127496.7-201ENST00000625110 1798 ntBASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 MME-217ENST00000616757 1315 ntTSL 5 BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 AC026471.6-201ENST00000622954 1905 ntBASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC32.43■■■□□ 2.78
CDK11AQ9UQ88 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 RNF121-214ENST00000533380 870 ntTSL 3 BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
CDK11AQ9UQ88 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CDK11AQ9UQ88 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC32.41■■■□□ 2.78
CDK11AQ9UQ88 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC32.41■■■□□ 2.78
CDK11AQ9UQ88 PTPA-214ENST00000423100 988 ntTSL 2 BASIC32.41■■■□□ 2.78
CDK11AQ9UQ88 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CDK11AQ9UQ88 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC32.41■■■□□ 2.78
CDK11AQ9UQ88 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC32.41■■■□□ 2.78
CDK11AQ9UQ88 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CDK11AQ9UQ88 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
CDK11AQ9UQ88 AC092368.3-202ENST00000574180 1591 ntBASIC32.41■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms