Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 MYCNOS-205ENST00000641950 531 ntBASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHA4Q9UN74 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHA4Q9UN74 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA4Q9UN74 AC016769.1-201ENST00000409132 1010 ntBASIC23.95■■□□□ 1.42
PCDHA4Q9UN74 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.95■■□□□ 1.42
PCDHA4Q9UN74 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA4Q9UN74 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
PCDHA4Q9UN74 AL049796.1-201ENST00000565336 1766 ntBASIC23.95■■□□□ 1.42
PCDHA4Q9UN74 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA4Q9UN74 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.94■■□□□ 1.42
PCDHA4Q9UN74 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 RARRES2P11-201ENST00000635158 484 ntBASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
PCDHA4Q9UN74 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDHA4Q9UN74 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.92■■□□□ 1.42
PCDHA4Q9UN74 AC005229.4-201ENST00000610085 2198 ntBASIC23.92■■□□□ 1.42
PCDHA4Q9UN74 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA4Q9UN74 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA4Q9UN74 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA4Q9UN74 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDHA4Q9UN74 IKBKGP1-201ENST00000612193 1073 ntBASIC23.92■■□□□ 1.42
PCDHA4Q9UN74 AC092437.1-201ENST00000624794 1048 ntBASIC23.92■■□□□ 1.42
PCDHA4Q9UN74 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDHA4Q9UN74 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA4Q9UN74 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA4Q9UN74 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
PCDHA4Q9UN74 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHA4Q9UN74 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA4Q9UN74 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
PCDHA4Q9UN74 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA4Q9UN74 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA4Q9UN74 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA4Q9UN74 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA4Q9UN74 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.89■■□□□ 1.42
PCDHA4Q9UN74 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.89■■□□□ 1.42
PCDHA4Q9UN74 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHA4Q9UN74 AL137060.1-201ENST00000618151 2648 ntBASIC23.89■■□□□ 1.42
PCDHA4Q9UN74 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHA4Q9UN74 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHA4Q9UN74 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHA4Q9UN74 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHA4Q9UN74 AC245052.3-201ENST00000450182 901 ntBASIC23.89■■□□□ 1.41
PCDHA4Q9UN74 MFSD11-216ENST00000590393 1141 ntBASIC23.89■■□□□ 1.41
PCDHA4Q9UN74 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHA4Q9UN74 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.89■■□□□ 1.41
PCDHA4Q9UN74 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHA4Q9UN74 RBM17P2-201ENST00000616397 1405 ntBASIC23.89■■□□□ 1.41
PCDHA4Q9UN74 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHA4Q9UN74 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 AC243732.1-201ENST00000612648 864 ntBASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms