Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 AC010141.3-201ENST00000456659 717 ntBASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT11Q9UKZ1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 RARRES2P6-201ENST00000567333 442 ntBASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 AC104564.3-201ENST00000582367 638 ntBASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 AC087239.1-201ENST00000622671 572 ntBASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT11Q9UKZ1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT11Q9UKZ1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT11Q9UKZ1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT11Q9UKZ1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT11Q9UKZ1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CNOT11Q9UKZ1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 AC026271.2-201ENST00000428091 497 ntBASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 AP005212.1-201ENST00000581547 1997 ntBASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.01■□□□□ 0.79
CNOT11Q9UKZ1 AL391422.3-201ENST00000603791 2761 ntBASIC20■□□□□ 0.79
CNOT11Q9UKZ1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CNOT11Q9UKZ1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT11Q9UKZ1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20■□□□□ 0.79
CNOT11Q9UKZ1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT11Q9UKZ1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT11Q9UKZ1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT11Q9UKZ1 AC012414.1-201ENST00000556676 535 ntBASIC20■□□□□ 0.79
CNOT11Q9UKZ1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20■□□□□ 0.79
CNOT11Q9UKZ1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20■□□□□ 0.79
CNOT11Q9UKZ1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20■□□□□ 0.79
CNOT11Q9UKZ1 AL358852.1-201ENST00000623174 1268 ntBASIC20■□□□□ 0.79
CNOT11Q9UKZ1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CNOT11Q9UKZ1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20■□□□□ 0.79
CNOT11Q9UKZ1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT11Q9UKZ1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT11Q9UKZ1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT11Q9UKZ1 AL049796.1-201ENST00000565336 1766 ntBASIC19.98■□□□□ 0.79
CNOT11Q9UKZ1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT11Q9UKZ1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT11Q9UKZ1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT11Q9UKZ1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT11Q9UKZ1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT11Q9UKZ1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT11Q9UKZ1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT11Q9UKZ1 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms