Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 AL031848.2-201ENST00000607670 837 ntBASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 AC090877.2-201ENST00000558441 1738 ntBASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
UBQLN2Q9UHD9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.57■□□□□ 0.4
UBQLN2Q9UHD9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 AC022616.5-201ENST00000518796 181 ntBASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 AL451085.2-201ENST00000605085 799 ntBASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.56■□□□□ 0.4
UBQLN2Q9UHD9 AP000974.1-201ENST00000623909 2387 ntBASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 AC005082.1-201ENST00000413042 2259 ntBASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 THA1P-201ENST00000590384 1145 ntBASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.55■□□□□ 0.4
UBQLN2Q9UHD9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms