Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.36■□□□□ 0.53
COMMD3Q9UBI1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
COMMD3Q9UBI1 PVT1_1.1-201ENST00000615125 194 ntBASIC18.36■□□□□ 0.53
COMMD3Q9UBI1 MIR6722-201ENST00000617286 78 ntBASIC18.36■□□□□ 0.53
COMMD3Q9UBI1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD3Q9UBI1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD3Q9UBI1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 AC009102.2-201ENST00000606772 1639 ntBASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD3Q9UBI1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 AL031602.1-201ENST00000633169 911 ntBASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD3Q9UBI1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
COMMD3Q9UBI1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD3Q9UBI1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
COMMD3Q9UBI1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
COMMD3Q9UBI1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD3Q9UBI1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD3Q9UBI1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD3Q9UBI1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD3Q9UBI1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
COMMD3Q9UBI1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.33■□□□□ 0.52
COMMD3Q9UBI1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.33■□□□□ 0.52
COMMD3Q9UBI1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD3Q9UBI1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD3Q9UBI1 AC020907.5-201ENST00000624372 1936 ntBASIC18.33■□□□□ 0.52
COMMD3Q9UBI1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD3Q9UBI1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD3Q9UBI1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms