Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCMF1Q9P0J7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCMF1Q9P0J7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 KRT16P2-201ENST00000414673 1423 ntBASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCMF1Q9P0J7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCMF1Q9P0J7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCMF1Q9P0J7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KCMF1Q9P0J7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCMF1Q9P0J7 SLC7A5P1-201ENST00000568957 537 ntBASIC19.77■□□□□ 0.76
KCMF1Q9P0J7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.77■□□□□ 0.76
KCMF1Q9P0J7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.77■□□□□ 0.76
KCMF1Q9P0J7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCMF1Q9P0J7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KCMF1Q9P0J7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
KCMF1Q9P0J7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KCMF1Q9P0J7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.77■□□□□ 0.75
KCMF1Q9P0J7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 AL137784.2-201ENST00000607332 1000 ntBASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 SLC25A24-204ENST00000569674 2357 ntBASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCMF1Q9P0J7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 AF106564.1-201ENST00000607058 2553 ntBASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 UBE2DNL-204ENST00000602536 740 ntBASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 AC120498.10-201ENST00000621827 505 ntBASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.75■□□□□ 0.75
KCMF1Q9P0J7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms