Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HCFC1R1Q9NWW0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
HCFC1R1Q9NWW0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.83■■□□□ 1.09
HCFC1R1Q9NWW0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HCFC1R1Q9NWW0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HCFC1R1Q9NWW0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
HCFC1R1Q9NWW0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.83■■□□□ 1.09
HCFC1R1Q9NWW0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
HCFC1R1Q9NWW0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
HCFC1R1Q9NWW0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.83■■□□□ 1.09
HCFC1R1Q9NWW0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.83■■□□□ 1.09
HCFC1R1Q9NWW0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.83■■□□□ 1.09
HCFC1R1Q9NWW0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.83■■□□□ 1.09
HCFC1R1Q9NWW0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
HCFC1R1Q9NWW0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HCFC1R1Q9NWW0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
HCFC1R1Q9NWW0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
HCFC1R1Q9NWW0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HCFC1R1Q9NWW0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 CDV3P1-201ENST00000471403 739 ntBASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 AC026366.1-201ENST00000488803 879 ntBASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
HCFC1R1Q9NWW0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 AP003097.1-201ENST00000530657 1135 ntBASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 AC142381.4-202ENST00000563973 229 ntBASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.81■■□□□ 1.08
HCFC1R1Q9NWW0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 AC073648.6-201ENST00000641589 218 ntBASIC21.8■■□□□ 1.08
HCFC1R1Q9NWW0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.79■■□□□ 1.08
HCFC1R1Q9NWW0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.78■■□□□ 1.08
HCFC1R1Q9NWW0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HCFC1R1Q9NWW0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC1R1Q9NWW0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.78■■□□□ 1.08
HCFC1R1Q9NWW0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC1R1Q9NWW0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.78■■□□□ 1.08
HCFC1R1Q9NWW0 AC100791.3-201ENST00000617619 330 ntBASIC21.78■■□□□ 1.08
HCFC1R1Q9NWW0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC1R1Q9NWW0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC1R1Q9NWW0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC1R1Q9NWW0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
HCFC1R1Q9NWW0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCFC1R1Q9NWW0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
HCFC1R1Q9NWW0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCFC1R1Q9NWW0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCFC1R1Q9NWW0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCFC1R1Q9NWW0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
HCFC1R1Q9NWW0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
HCFC1R1Q9NWW0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
HCFC1R1Q9NWW0 AC008403.3-201ENST00000598924 454 ntBASIC21.77■■□□□ 1.08
HCFC1R1Q9NWW0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.77■■□□□ 1.08
HCFC1R1Q9NWW0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
HCFC1R1Q9NWW0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms