Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.84■□□□□ 0.77
CCM2LQ9NUG4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2LQ9NUG4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.83■□□□□ 0.76
CCM2LQ9NUG4 AFG3L1P-217ENST00000557444 2447 ntBASIC19.83■□□□□ 0.76
CCM2LQ9NUG4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.83■□□□□ 0.76
CCM2LQ9NUG4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCM2LQ9NUG4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CCM2LQ9NUG4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 PLK5-205ENST00000642079 1969 ntBASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 SYT6-210ENST00000641643 1587 ntBASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 AL391422.3-201ENST00000603791 2761 ntBASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2LQ9NUG4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 MIR4767-201ENST00000582827 78 ntBASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CCM2LQ9NUG4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2LQ9NUG4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2LQ9NUG4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2LQ9NUG4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.79■□□□□ 0.76
CCM2LQ9NUG4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2LQ9NUG4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.79■□□□□ 0.76
CCM2LQ9NUG4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.79■□□□□ 0.76
CCM2LQ9NUG4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.79■□□□□ 0.76
CCM2LQ9NUG4 AC003102.1-202ENST00000563394 1796 ntBASIC19.79■□□□□ 0.76
CCM2LQ9NUG4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2LQ9NUG4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms