Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SDHAF3Q9NRP4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 AC061975.6-201ENST00000579045 1553 ntBASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDHAF3Q9NRP4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SDHAF3Q9NRP4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SDHAF3Q9NRP4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SDHAF3Q9NRP4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
SDHAF3Q9NRP4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 SLC7A5P2-201ENST00000553010 536 ntBASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 UBE2DNL-204ENST00000602536 740 ntBASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 AL137784.2-201ENST00000607332 1000 ntBASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 MYCNOS-205ENST00000641950 531 ntBASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.14■□□□□ 0.65
SDHAF3Q9NRP4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 AC006015.1-201ENST00000429970 570 ntBASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.13■□□□□ 0.65
SDHAF3Q9NRP4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms