Protein–RNA interactions for Protein: Q9NQ36

SCUBE2, Signal peptide, CUB and EGF-like domain-containing protein 2, humanhuman

Predictions only

Length 999 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2Q9NQ36 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 POU5F1P4-201ENST00000413175 1085 ntBASIC21.31■■□□□ 1
SCUBE2Q9NQ36 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE2Q9NQ36 AC061975.6-201ENST00000579045 1553 ntBASIC21.31■■□□□ 1
SCUBE2Q9NQ36 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 AL109923.1-201ENST00000618799 583 ntBASIC21.3■■□□□ 1
SCUBE2Q9NQ36 AC120498.10-201ENST00000621827 505 ntBASIC21.3■■□□□ 1
SCUBE2Q9NQ36 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SCUBE2Q9NQ36 Z98882.1-201ENST00000622160 2253 ntBASIC21.3■■□□□ 1
SCUBE2Q9NQ36 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 AC016769.1-201ENST00000409132 1010 ntBASIC21.29■■□□□ 1
SCUBE2Q9NQ36 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.29■■□□□ 1
SCUBE2Q9NQ36 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 CD99P1-205ENST00000527459 561 ntBASIC21.29■■□□□ 1
SCUBE2Q9NQ36 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCUBE2Q9NQ36 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SCUBE2Q9NQ36 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SCUBE2Q9NQ36 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SCUBE2Q9NQ36 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SCUBE2Q9NQ36 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SCUBE2Q9NQ36 KRT18P20-201ENST00000548986 1279 ntBASIC21.28■■□□□ 1
SCUBE2Q9NQ36 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.28■■□□□ 1
SCUBE2Q9NQ36 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCUBE2Q9NQ36 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCUBE2Q9NQ36 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SCUBE2Q9NQ36 AL024507.2-201ENST00000606070 2574 ntBASIC21.28■■□□□ 1
SCUBE2Q9NQ36 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCUBE2Q9NQ36 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SCUBE2Q9NQ36 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 SLC7A5P2-201ENST00000553010 536 ntBASIC21.27■■□□□ 1
SCUBE2Q9NQ36 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SCUBE2Q9NQ36 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SCUBE2Q9NQ36 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
SCUBE2Q9NQ36 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 AC006970.2-201ENST00000450065 779 ntBASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 UBE2DNL-204ENST00000602536 740 ntBASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE2Q9NQ36 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms