Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.77■□□□□ 0.92
SSU72Q9NP77 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.77■□□□□ 0.92
SSU72Q9NP77 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.77■□□□□ 0.92
SSU72Q9NP77 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.77■□□□□ 0.92
SSU72Q9NP77 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSU72Q9NP77 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.77■□□□□ 0.92
SSU72Q9NP77 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSU72Q9NP77 AL138724.1-201ENST00000606771 1088 ntBASIC20.77■□□□□ 0.92
SSU72Q9NP77 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSU72Q9NP77 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
SSU72Q9NP77 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SSU72Q9NP77 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.77■□□□□ 0.91
SSU72Q9NP77 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
SSU72Q9NP77 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSU72Q9NP77 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSU72Q9NP77 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SSU72Q9NP77 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSU72Q9NP77 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSU72Q9NP77 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SSU72Q9NP77 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.76■□□□□ 0.91
SSU72Q9NP77 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.76■□□□□ 0.91
SSU72Q9NP77 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SSU72Q9NP77 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSU72Q9NP77 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.76■□□□□ 0.91
SSU72Q9NP77 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSU72Q9NP77 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSU72Q9NP77 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSU72Q9NP77 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.76■□□□□ 0.91
SSU72Q9NP77 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.75■□□□□ 0.91
SSU72Q9NP77 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSU72Q9NP77 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSU72Q9NP77 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSU72Q9NP77 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.75■□□□□ 0.91
SSU72Q9NP77 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSU72Q9NP77 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SSU72Q9NP77 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.75■□□□□ 0.91
SSU72Q9NP77 AC009299.2-201ENST00000482477 511 ntBASIC20.75■□□□□ 0.91
SSU72Q9NP77 AL356740.2-201ENST00000601559 647 ntBASIC20.75■□□□□ 0.91
SSU72Q9NP77 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SSU72Q9NP77 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.75■□□□□ 0.91
SSU72Q9NP77 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSU72Q9NP77 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSU72Q9NP77 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSU72Q9NP77 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SSU72Q9NP77 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSU72Q9NP77 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSU72Q9NP77 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SSU72Q9NP77 SRD5A1P1-201ENST00000442297 786 ntBASIC20.74■□□□□ 0.91
SSU72Q9NP77 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSU72Q9NP77 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSU72Q9NP77 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSU72Q9NP77 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSU72Q9NP77 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.73■□□□□ 0.91
SSU72Q9NP77 AC099778.1-201ENST00000568593 1911 ntBASIC20.73■□□□□ 0.91
SSU72Q9NP77 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSU72Q9NP77 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSU72Q9NP77 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.73■□□□□ 0.91
SSU72Q9NP77 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSU72Q9NP77 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSU72Q9NP77 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SSU72Q9NP77 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SSU72Q9NP77 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSU72Q9NP77 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSU72Q9NP77 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.73■□□□□ 0.91
SSU72Q9NP77 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSU72Q9NP77 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.72■□□□□ 0.91
SSU72Q9NP77 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SSU72Q9NP77 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SSU72Q9NP77 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSU72Q9NP77 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSU72Q9NP77 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSU72Q9NP77 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.72■□□□□ 0.91
SSU72Q9NP77 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSU72Q9NP77 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSU72Q9NP77 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.72■□□□□ 0.91
SSU72Q9NP77 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSU72Q9NP77 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSU72Q9NP77 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSU72Q9NP77 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.72■□□□□ 0.91
SSU72Q9NP77 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSU72Q9NP77 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSU72Q9NP77 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSU72Q9NP77 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.71■□□□□ 0.91
SSU72Q9NP77 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.71■□□□□ 0.91
SSU72Q9NP77 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSU72Q9NP77 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSU72Q9NP77 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSU72Q9NP77 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.71■□□□□ 0.91
SSU72Q9NP77 KRT16P3-201ENST00000439127 1283 ntBASIC20.71■□□□□ 0.91
SSU72Q9NP77 MIR3621-201ENST00000580529 85 ntBASIC20.71■□□□□ 0.91
SSU72Q9NP77 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.71■□□□□ 0.91
SSU72Q9NP77 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSU72Q9NP77 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SSU72Q9NP77 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSU72Q9NP77 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSU72Q9NP77 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSU72Q9NP77 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.71■□□□□ 0.91
SSU72Q9NP77 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSU72Q9NP77 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
SSU72Q9NP77 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms