Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
POPDC3Q9HBV1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
POPDC3Q9HBV1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
POPDC3Q9HBV1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 AC138907.5-202ENST00000569484 235 ntBASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
POPDC3Q9HBV1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 FEM1AP1-201ENST00000431297 1995 ntBASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 MIR638-201ENST00000385237 100 ntBASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POPDC3Q9HBV1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 LINC02228-203ENST00000641970 1355 ntBASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.53■□□□□ 0.88
POPDC3Q9HBV1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
POPDC3Q9HBV1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
POPDC3Q9HBV1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 AC123595.1-201ENST00000440769 1046 ntBASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 KRT16P2-201ENST00000414673 1423 ntBASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
POPDC3Q9HBV1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms