Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RC3H2Q9HBD1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RC3H2Q9HBD1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
RC3H2Q9HBD1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RC3H2Q9HBD1 AC026471.6-201ENST00000622954 1905 ntBASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RC3H2Q9HBD1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RC3H2Q9HBD1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RC3H2Q9HBD1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RC3H2Q9HBD1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.44■■□□□ 1.18
RC3H2Q9HBD1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RC3H2Q9HBD1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RC3H2Q9HBD1 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.44■■□□□ 1.18
RC3H2Q9HBD1 RPPH1-201ENST00000516869 333 ntBASIC22.44■■□□□ 1.18
RC3H2Q9HBD1 C11orf96-202ENST00000528572 1834 ntBASIC22.44■■□□□ 1.18
RC3H2Q9HBD1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.43■■□□□ 1.18
RC3H2Q9HBD1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 AC233263.1-201ENST00000578059 224 ntBASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RC3H2Q9HBD1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RC3H2Q9HBD1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.41■■□□□ 1.18
RC3H2Q9HBD1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RC3H2Q9HBD1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RC3H2Q9HBD1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.41■■□□□ 1.18
RC3H2Q9HBD1 KRT18P68-201ENST00000392293 1000 ntBASIC22.41■■□□□ 1.18
RC3H2Q9HBD1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RC3H2Q9HBD1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.41■■□□□ 1.18
RC3H2Q9HBD1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.41■■□□□ 1.18
RC3H2Q9HBD1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.41■■□□□ 1.18
RC3H2Q9HBD1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RC3H2Q9HBD1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RC3H2Q9HBD1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 RN7SL471P-201ENST00000580476 299 ntBASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms