Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 AC007322.1-201ENST00000426983 750 ntBASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 RAP2CP1-201ENST00000605103 478 ntBASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 AC073111.5-205ENST00000641717 521 ntBASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 AC091799.1-201ENST00000422823 811 ntBASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 CNN2P6-201ENST00000439038 900 ntBASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 CDCA4P2-201ENST00000441182 718 ntBASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 AC026185.1-201ENST00000445748 174 ntBASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
RETREG1Q9H6L5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG1Q9H6L5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG1Q9H6L5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RETREG1Q9H6L5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RETREG1Q9H6L5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG1Q9H6L5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG1Q9H6L5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG1Q9H6L5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG1Q9H6L5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.33■■□□□ 1.01
RETREG1Q9H6L5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.33■■□□□ 1.01
RETREG1Q9H6L5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.33■■□□□ 1.01
RETREG1Q9H6L5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG1Q9H6L5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RETREG1Q9H6L5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RETREG1Q9H6L5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.33■■□□□ 1
RETREG1Q9H6L5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.33■■□□□ 1
RETREG1Q9H6L5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.33■■□□□ 1
RETREG1Q9H6L5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.32■■□□□ 1
RETREG1Q9H6L5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RETREG1Q9H6L5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG1Q9H6L5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG1Q9H6L5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG1Q9H6L5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.32■■□□□ 1
RETREG1Q9H6L5 CDV3P1-201ENST00000471403 739 ntBASIC21.32■■□□□ 1
RETREG1Q9H6L5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.32■■□□□ 1
RETREG1Q9H6L5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.32■■□□□ 1
RETREG1Q9H6L5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG1Q9H6L5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG1Q9H6L5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.32■■□□□ 1
RETREG1Q9H6L5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.32■■□□□ 1
RETREG1Q9H6L5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG1Q9H6L5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.31■■□□□ 1
RETREG1Q9H6L5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.31■■□□□ 1
RETREG1Q9H6L5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG1Q9H6L5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG1Q9H6L5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.31■■□□□ 1
RETREG1Q9H6L5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RETREG1Q9H6L5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG1Q9H6L5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.31■■□□□ 1
RETREG1Q9H6L5 FAM21FP-204ENST00000608637 956 ntBASIC21.31■■□□□ 1
RETREG1Q9H6L5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.31■■□□□ 1
RETREG1Q9H6L5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RETREG1Q9H6L5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.31■■□□□ 1
RETREG1Q9H6L5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
RETREG1Q9H6L5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.31■■□□□ 1
RETREG1Q9H6L5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.31■■□□□ 1
RETREG1Q9H6L5 AL049796.1-201ENST00000565336 1766 ntBASIC21.31■■□□□ 1
RETREG1Q9H6L5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.3■■□□□ 1
RETREG1Q9H6L5 AC068338.2-201ENST00000563278 1430 ntBASIC21.3■■□□□ 1
RETREG1Q9H6L5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG1Q9H6L5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG1Q9H6L5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.3■■□□□ 1
RETREG1Q9H6L5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.3■■□□□ 1
RETREG1Q9H6L5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG1Q9H6L5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.3■■□□□ 1
RETREG1Q9H6L5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms