Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19■□□□□ 0.63
PCNX3Q9H6A9 RBM17P2-201ENST00000616397 1405 ntBASIC19■□□□□ 0.63
PCNX3Q9H6A9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCNX3Q9H6A9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCNX3Q9H6A9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PCNX3Q9H6A9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCNX3Q9H6A9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19■□□□□ 0.63
PCNX3Q9H6A9 AC092666.2-201ENST00000613287 246 ntBASIC19■□□□□ 0.63
PCNX3Q9H6A9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19■□□□□ 0.63
PCNX3Q9H6A9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCNX3Q9H6A9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCNX3Q9H6A9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 CDCA4P2-201ENST00000441182 718 ntBASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 AL137784.2-201ENST00000607332 1000 ntBASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCNX3Q9H6A9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.97■□□□□ 0.63
PCNX3Q9H6A9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 AC026185.1-201ENST00000445748 174 ntBASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 AC068338.2-201ENST00000563278 1430 ntBASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.96■□□□□ 0.63
PCNX3Q9H6A9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 AC013268.1-206ENST00000638368 961 ntBASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 AC112229.1-201ENST00000639295 961 ntBASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 AC007322.3-201ENST00000426526 701 ntBASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 AC073111.5-205ENST00000641717 521 ntBASIC18.95■□□□□ 0.62
PCNX3Q9H6A9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms