Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
KDM4CQ9H3R0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM4CQ9H3R0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 AC009237.3-201ENST00000393279 1427 ntBASIC21.71■■□□□ 1.07
KDM4CQ9H3R0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.7■■□□□ 1.07
KDM4CQ9H3R0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 KRT19P1-201ENST00000405746 1186 ntBASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 AC006015.1-201ENST00000429970 570 ntBASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM4CQ9H3R0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 KRT18P61-201ENST00000585825 1298 ntBASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.69■■□□□ 1.06
KDM4CQ9H3R0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM4CQ9H3R0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 AC004854.2-201ENST00000608450 1441 ntBASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 AC016769.1-201ENST00000409132 1010 ntBASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 AC137761.2-201ENST00000561729 223 ntBASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 AC145350.3-201ENST00000569033 163 ntBASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM4CQ9H3R0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 AC079140.4-201ENST00000507448 529 ntBASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 AC005224.4-201ENST00000583262 1652 ntBASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KDM4CQ9H3R0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
KDM4CQ9H3R0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms