Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PHACTR1Q9C0D0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.19■□□□□ 0.98
PHACTR1Q9C0D0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PHACTR1Q9C0D0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.19■□□□□ 0.98
PHACTR1Q9C0D0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.19■□□□□ 0.98
PHACTR1Q9C0D0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHACTR1Q9C0D0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHACTR1Q9C0D0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PHACTR1Q9C0D0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHACTR1Q9C0D0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHACTR1Q9C0D0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PHACTR1Q9C0D0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PHACTR1Q9C0D0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 AC233992.3-201ENST00000607491 485 ntBASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 AC027702.1-201ENST00000563810 1770 ntBASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHACTR1Q9C0D0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 AC020907.5-201ENST00000624372 1936 ntBASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHACTR1Q9C0D0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 AC005224.4-201ENST00000583262 1652 ntBASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 BX005040.4-201ENST00000637145 1518 ntBASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 MIR4767-201ENST00000582827 78 ntBASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 AC131212.1-201ENST00000613771 668 ntBASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.16■□□□□ 0.98
PHACTR1Q9C0D0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.15■□□□□ 0.98
PHACTR1Q9C0D0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PHACTR1Q9C0D0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.14■□□□□ 0.98
PHACTR1Q9C0D0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.98
PHACTR1Q9C0D0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PHACTR1Q9C0D0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PHACTR1Q9C0D0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PHACTR1Q9C0D0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PHACTR1Q9C0D0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PHACTR1Q9C0D0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms