Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TUBA1CQ9BQE3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TUBA1CQ9BQE3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TUBA1CQ9BQE3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
TUBA1CQ9BQE3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TUBA1CQ9BQE3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 AC027612.3-201ENST00000413684 1047 ntBASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 AC068587.7-201ENST00000641602 218 ntBASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 AC105233.4-201ENST00000642045 216 ntBASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TUBA1CQ9BQE3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 AL031602.1-201ENST00000633169 911 ntBASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TUBA1CQ9BQE3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.62■□□□□ 0.73
TUBA1CQ9BQE3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 AL162430.1-201ENST00000480705 870 ntBASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 AC087239.1-201ENST00000622671 572 ntBASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBA1CQ9BQE3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1CQ9BQE3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.6■□□□□ 0.73
TUBA1CQ9BQE3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1CQ9BQE3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1CQ9BQE3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.6■□□□□ 0.73
TUBA1CQ9BQE3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1CQ9BQE3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TUBA1CQ9BQE3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1CQ9BQE3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms