Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CMSS1Q9BQ75 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 SLC47A1P1-202ENST00000449666 945 ntBASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.77■□□□□ 0.44
CMSS1Q9BQ75 AP006587.3-201ENST00000525742 1516 ntBASIC17.77■□□□□ 0.43
CMSS1Q9BQ75 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CMSS1Q9BQ75 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
CMSS1Q9BQ75 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 LINC01006-201ENST00000333319 2292 ntBASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 AC011298.3-201ENST00000615796 283 ntBASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CMSS1Q9BQ75 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 FEM1AP1-201ENST00000431297 1995 ntBASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.75■□□□□ 0.43
CMSS1Q9BQ75 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CMSS1Q9BQ75 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMSS1Q9BQ75 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms