Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE1Q99829 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CPNE1Q99829 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE1Q99829 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE1Q99829 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.89■□□□□ 0.94
CPNE1Q99829 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.89■□□□□ 0.94
CPNE1Q99829 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.89■□□□□ 0.94
CPNE1Q99829 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE1Q99829 MIR572-201ENST00000384983 95 ntBASIC20.89■□□□□ 0.93
CPNE1Q99829 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.89■□□□□ 0.93
CPNE1Q99829 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.89■□□□□ 0.93
CPNE1Q99829 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.89■□□□□ 0.93
CPNE1Q99829 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE1Q99829 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.89■□□□□ 0.93
CPNE1Q99829 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
CPNE1Q99829 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE1Q99829 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.89■□□□□ 0.93
CPNE1Q99829 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE1Q99829 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.89■□□□□ 0.93
CPNE1Q99829 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CPNE1Q99829 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE1Q99829 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE1Q99829 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE1Q99829 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE1Q99829 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE1Q99829 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE1Q99829 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CPNE1Q99829 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE1Q99829 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.88■□□□□ 0.93
CPNE1Q99829 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE1Q99829 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CPNE1Q99829 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE1Q99829 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE1Q99829 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE1Q99829 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE1Q99829 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CPNE1Q99829 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.88■□□□□ 0.93
CPNE1Q99829 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.87■□□□□ 0.93
CPNE1Q99829 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE1Q99829 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE1Q99829 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CPNE1Q99829 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CPNE1Q99829 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.87■□□□□ 0.93
CPNE1Q99829 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE1Q99829 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.87■□□□□ 0.93
CPNE1Q99829 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.87■□□□□ 0.93
CPNE1Q99829 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.87■□□□□ 0.93
CPNE1Q99829 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.87■□□□□ 0.93
CPNE1Q99829 GABARAPL3-202ENST00000624044 1851 ntBASIC20.87■□□□□ 0.93
CPNE1Q99829 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE1Q99829 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.87■□□□□ 0.93
CPNE1Q99829 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE1Q99829 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE1Q99829 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE1Q99829 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE1Q99829 RASA4CP-201ENST00000424092 1398 ntBASIC20.86■□□□□ 0.93
CPNE1Q99829 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CPNE1Q99829 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE1Q99829 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CPNE1Q99829 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE1Q99829 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE1Q99829 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.86■□□□□ 0.93
CPNE1Q99829 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE1Q99829 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE1Q99829 AL355001.2-201ENST00000620617 1191 ntBASIC20.86■□□□□ 0.93
CPNE1Q99829 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE1Q99829 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE1Q99829 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE1Q99829 AP005212.1-201ENST00000581547 1997 ntBASIC20.86■□□□□ 0.93
CPNE1Q99829 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE1Q99829 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE1Q99829 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CPNE1Q99829 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.85■□□□□ 0.93
CPNE1Q99829 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CPNE1Q99829 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.85■□□□□ 0.93
CPNE1Q99829 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.85■□□□□ 0.93
CPNE1Q99829 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE1Q99829 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.85■□□□□ 0.93
CPNE1Q99829 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.85■□□□□ 0.93
CPNE1Q99829 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.85■□□□□ 0.93
CPNE1Q99829 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
CPNE1Q99829 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE1Q99829 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.85■□□□□ 0.93
CPNE1Q99829 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE1Q99829 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE1Q99829 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE1Q99829 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE1Q99829 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE1Q99829 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE1Q99829 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE1Q99829 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.84■□□□□ 0.93
CPNE1Q99829 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE1Q99829 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE1Q99829 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE1Q99829 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE1Q99829 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CPNE1Q99829 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE1Q99829 MIR939-201ENST00000401314 82 ntBASIC20.84■□□□□ 0.93
CPNE1Q99829 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.84■□□□□ 0.93
CPNE1Q99829 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms