Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCL13Q99616 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCL13Q99616 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL13Q99616 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCL13Q99616 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCL13Q99616 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
CCL13Q99616 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL13Q99616 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL13Q99616 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.51■□□□□ 0.39
CCL13Q99616 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL13Q99616 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.51■□□□□ 0.39
CCL13Q99616 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.51■□□□□ 0.39
CCL13Q99616 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.51■□□□□ 0.39
CCL13Q99616 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.51■□□□□ 0.39
CCL13Q99616 KRT18P20-201ENST00000548986 1279 ntBASIC17.51■□□□□ 0.39
CCL13Q99616 UBE2DNL-204ENST00000602536 740 ntBASIC17.51■□□□□ 0.39
CCL13Q99616 IKBKGP1-201ENST00000612193 1073 ntBASIC17.51■□□□□ 0.39
CCL13Q99616 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCL13Q99616 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.51■□□□□ 0.39
CCL13Q99616 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
CCL13Q99616 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL13Q99616 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL13Q99616 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCL13Q99616 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL13Q99616 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.5■□□□□ 0.39
CCL13Q99616 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCL13Q99616 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.5■□□□□ 0.39
CCL13Q99616 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL13Q99616 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.5■□□□□ 0.39
CCL13Q99616 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCL13Q99616 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL13Q99616 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCL13Q99616 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.5■□□□□ 0.39
CCL13Q99616 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCL13Q99616 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CCL13Q99616 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL13Q99616 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCL13Q99616 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCL13Q99616 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL13Q99616 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.49■□□□□ 0.39
CCL13Q99616 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL13Q99616 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCL13Q99616 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL13Q99616 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL13Q99616 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL13Q99616 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.49■□□□□ 0.39
CCL13Q99616 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL13Q99616 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCL13Q99616 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.49■□□□□ 0.39
CCL13Q99616 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.49■□□□□ 0.39
CCL13Q99616 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL13Q99616 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.49■□□□□ 0.39
CCL13Q99616 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL13Q99616 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL13Q99616 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCL13Q99616 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCL13Q99616 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCL13Q99616 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL13Q99616 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL13Q99616 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.48■□□□□ 0.39
CCL13Q99616 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.48■□□□□ 0.39
CCL13Q99616 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL13Q99616 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCL13Q99616 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.48■□□□□ 0.39
CCL13Q99616 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCL13Q99616 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.48■□□□□ 0.39
CCL13Q99616 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL13Q99616 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL13Q99616 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.48■□□□□ 0.39
CCL13Q99616 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.48■□□□□ 0.39
CCL13Q99616 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL13Q99616 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL13Q99616 AC092666.2-201ENST00000613287 246 ntBASIC17.48■□□□□ 0.39
CCL13Q99616 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCL13Q99616 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL13Q99616 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL13Q99616 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL13Q99616 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL13Q99616 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL13Q99616 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL13Q99616 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL13Q99616 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL13Q99616 KRT16P2-201ENST00000414673 1423 ntBASIC17.47■□□□□ 0.39
CCL13Q99616 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL13Q99616 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CCL13Q99616 AC026310.3-201ENST00000625186 2373 ntBASIC17.47■□□□□ 0.39
CCL13Q99616 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL13Q99616 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL13Q99616 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL13Q99616 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.47■□□□□ 0.39
CCL13Q99616 MYCNOS-205ENST00000641950 531 ntBASIC17.47■□□□□ 0.39
CCL13Q99616 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL13Q99616 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL13Q99616 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL13Q99616 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL13Q99616 AC007375.3-201ENST00000600936 2314 ntBASIC17.47■□□□□ 0.39
CCL13Q99616 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL13Q99616 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL13Q99616 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL13Q99616 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms