Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MUC4Q99102 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
MUC4Q99102 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.23■□□□□ 0.03
MUC4Q99102 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.23■□□□□ 0.03
MUC4Q99102 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.23■□□□□ 0.03
MUC4Q99102 TSPY26P-201ENST00000476365 1326 ntBASIC15.23■□□□□ 0.03
MUC4Q99102 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.23■□□□□ 0.03
MUC4Q99102 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.23■□□□□ 0.03
MUC4Q99102 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.23■□□□□ 0.03
MUC4Q99102 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.23■□□□□ 0.03
MUC4Q99102 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.23■□□□□ 0.03
MUC4Q99102 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.23■□□□□ 0.03
MUC4Q99102 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.23■□□□□ 0.03
MUC4Q99102 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.23■□□□□ 0.03
MUC4Q99102 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MUC4Q99102 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MUC4Q99102 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.22■□□□□ 0.03
MUC4Q99102 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.22■□□□□ 0.03
MUC4Q99102 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
MUC4Q99102 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MUC4Q99102 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.22■□□□□ 0.03
MUC4Q99102 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MUC4Q99102 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.22■□□□□ 0.03
MUC4Q99102 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 AC022517.1-201ENST00000592429 346 ntBASIC15.22■□□□□ 0.03
MUC4Q99102 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MUC4Q99102 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
MUC4Q99102 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.21■□□□□ 0.03
MUC4Q99102 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MUC4Q99102 AL391422.3-201ENST00000603791 2761 ntBASIC15.21■□□□□ 0.03
MUC4Q99102 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
MUC4Q99102 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
MUC4Q99102 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.21■□□□□ 0.03
MUC4Q99102 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MUC4Q99102 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MUC4Q99102 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MUC4Q99102 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MUC4Q99102 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MUC4Q99102 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MUC4Q99102 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.21■□□□□ 0.02
MUC4Q99102 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
MUC4Q99102 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
MUC4Q99102 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.2■□□□□ 0.02
MUC4Q99102 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
MUC4Q99102 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
MUC4Q99102 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.2■□□□□ 0.02
MUC4Q99102 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
MUC4Q99102 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
MUC4Q99102 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.2■□□□□ 0.02
MUC4Q99102 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MUC4Q99102 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MUC4Q99102 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.19■□□□□ 0.02
MUC4Q99102 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MUC4Q99102 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.19■□□□□ 0.02
MUC4Q99102 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.19■□□□□ 0.02
MUC4Q99102 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MUC4Q99102 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MUC4Q99102 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms