Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.22■□□□□ 0.99
HHIPQ96QV1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.22■□□□□ 0.99
HHIPQ96QV1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HHIPQ96QV1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HHIPQ96QV1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.22■□□□□ 0.99
HHIPQ96QV1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.22■□□□□ 0.99
HHIPQ96QV1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.22■□□□□ 0.99
HHIPQ96QV1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.22■□□□□ 0.99
HHIPQ96QV1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.21■□□□□ 0.99
HHIPQ96QV1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.21■□□□□ 0.99
HHIPQ96QV1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HHIPQ96QV1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HHIPQ96QV1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HHIPQ96QV1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HHIPQ96QV1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HHIPQ96QV1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HHIPQ96QV1 LSM12P1-201ENST00000411836 588 ntBASIC21.21■□□□□ 0.99
HHIPQ96QV1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.21■□□□□ 0.99
HHIPQ96QV1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.21■□□□□ 0.99
HHIPQ96QV1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.21■□□□□ 0.99
HHIPQ96QV1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HHIPQ96QV1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HHIPQ96QV1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HHIPQ96QV1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
HHIPQ96QV1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HHIPQ96QV1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HHIPQ96QV1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HHIPQ96QV1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.2■□□□□ 0.98
HHIPQ96QV1 AL596275.1-201ENST00000423464 877 ntBASIC21.2■□□□□ 0.98
HHIPQ96QV1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HHIPQ96QV1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HHIPQ96QV1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.2■□□□□ 0.98
HHIPQ96QV1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.2■□□□□ 0.98
HHIPQ96QV1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HHIPQ96QV1 AC243732.1-201ENST00000612648 864 ntBASIC21.2■□□□□ 0.98
HHIPQ96QV1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.2■□□□□ 0.98
HHIPQ96QV1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HHIPQ96QV1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HHIPQ96QV1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.2■□□□□ 0.98
HHIPQ96QV1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HHIPQ96QV1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.19■□□□□ 0.98
HHIPQ96QV1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HHIPQ96QV1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HHIPQ96QV1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HHIPQ96QV1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HHIPQ96QV1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HHIPQ96QV1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HHIPQ96QV1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.19■□□□□ 0.98
HHIPQ96QV1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.19■□□□□ 0.98
HHIPQ96QV1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HHIPQ96QV1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HHIPQ96QV1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.19■□□□□ 0.98
HHIPQ96QV1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.19■□□□□ 0.98
HHIPQ96QV1 AC026366.1-201ENST00000488803 879 ntBASIC21.19■□□□□ 0.98
HHIPQ96QV1 UNC93B5-201ENST00000530315 699 ntBASIC21.19■□□□□ 0.98
HHIPQ96QV1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.19■□□□□ 0.98
HHIPQ96QV1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.19■□□□□ 0.98
HHIPQ96QV1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HHIPQ96QV1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HHIPQ96QV1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HHIPQ96QV1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HHIPQ96QV1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.19■□□□□ 0.98
HHIPQ96QV1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HHIPQ96QV1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HHIPQ96QV1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HHIPQ96QV1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HHIPQ96QV1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HHIPQ96QV1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.18■□□□□ 0.98
HHIPQ96QV1 RPS2P4-201ENST00000476944 856 ntBASIC21.18■□□□□ 0.98
HHIPQ96QV1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HHIPQ96QV1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.18■□□□□ 0.98
HHIPQ96QV1 AP003097.1-201ENST00000530657 1135 ntBASIC21.18■□□□□ 0.98
HHIPQ96QV1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
HHIPQ96QV1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.18■□□□□ 0.98
HHIPQ96QV1 AC073648.6-201ENST00000641589 218 ntBASIC21.18■□□□□ 0.98
HHIPQ96QV1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HHIPQ96QV1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.18■□□□□ 0.98
HHIPQ96QV1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HHIPQ96QV1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HHIPQ96QV1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HHIPQ96QV1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HHIPQ96QV1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.18■□□□□ 0.98
HHIPQ96QV1 AC242852.2-201ENST00000615738 1807 ntBASIC21.18■□□□□ 0.98
HHIPQ96QV1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
HHIPQ96QV1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HHIPQ96QV1 AC139530.1-201ENST00000575312 1977 ntBASIC21.17■□□□□ 0.98
HHIPQ96QV1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HHIPQ96QV1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HHIPQ96QV1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HHIPQ96QV1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HHIPQ96QV1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HHIPQ96QV1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.17■□□□□ 0.98
HHIPQ96QV1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.17■□□□□ 0.98
HHIPQ96QV1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.17■□□□□ 0.98
HHIPQ96QV1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.17■□□□□ 0.98
HHIPQ96QV1 UNC93B4-201ENST00000505679 747 ntBASIC21.17■□□□□ 0.98
HHIPQ96QV1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.17■□□□□ 0.98
HHIPQ96QV1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.17■□□□□ 0.98
HHIPQ96QV1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HHIPQ96QV1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms