Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CASD1Q96PB1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CASD1Q96PB1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.46■■□□□ 1.19
CASD1Q96PB1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CASD1Q96PB1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CASD1Q96PB1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.46■■□□□ 1.19
CASD1Q96PB1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CASD1Q96PB1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.46■■□□□ 1.19
CASD1Q96PB1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CASD1Q96PB1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CASD1Q96PB1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CASD1Q96PB1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
CASD1Q96PB1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASD1Q96PB1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CASD1Q96PB1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASD1Q96PB1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CASD1Q96PB1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASD1Q96PB1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.45■■□□□ 1.18
CASD1Q96PB1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CASD1Q96PB1 AP003097.1-201ENST00000530657 1135 ntBASIC22.45■■□□□ 1.18
CASD1Q96PB1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
CASD1Q96PB1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.45■■□□□ 1.18
CASD1Q96PB1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CASD1Q96PB1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASD1Q96PB1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASD1Q96PB1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.45■■□□□ 1.18
CASD1Q96PB1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
CASD1Q96PB1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.45■■□□□ 1.18
CASD1Q96PB1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASD1Q96PB1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASD1Q96PB1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.45■■□□□ 1.18
CASD1Q96PB1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CASD1Q96PB1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASD1Q96PB1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASD1Q96PB1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASD1Q96PB1 MCRIP2P1-201ENST00000394346 511 ntBASIC22.44■■□□□ 1.18
CASD1Q96PB1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.44■■□□□ 1.18
CASD1Q96PB1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASD1Q96PB1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CASD1Q96PB1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.44■■□□□ 1.18
CASD1Q96PB1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASD1Q96PB1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.44■■□□□ 1.18
CASD1Q96PB1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CASD1Q96PB1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CASD1Q96PB1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.43■■□□□ 1.18
CASD1Q96PB1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CASD1Q96PB1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CASD1Q96PB1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CASD1Q96PB1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CASD1Q96PB1 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.43■■□□□ 1.18
CASD1Q96PB1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
CASD1Q96PB1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.43■■□□□ 1.18
CASD1Q96PB1 AC142381.4-202ENST00000563973 229 ntBASIC22.43■■□□□ 1.18
CASD1Q96PB1 AC073648.6-201ENST00000641589 218 ntBASIC22.43■■□□□ 1.18
CASD1Q96PB1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.43■■□□□ 1.18
CASD1Q96PB1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CASD1Q96PB1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CASD1Q96PB1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.42■■□□□ 1.18
CASD1Q96PB1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CASD1Q96PB1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CASD1Q96PB1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CASD1Q96PB1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.42■■□□□ 1.18
CASD1Q96PB1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.42■■□□□ 1.18
CASD1Q96PB1 AL158047.1-201ENST00000445918 881 ntBASIC22.42■■□□□ 1.18
CASD1Q96PB1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CASD1Q96PB1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.42■■□□□ 1.18
CASD1Q96PB1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.42■■□□□ 1.18
CASD1Q96PB1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.42■■□□□ 1.18
CASD1Q96PB1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
CASD1Q96PB1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CASD1Q96PB1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CASD1Q96PB1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CASD1Q96PB1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CASD1Q96PB1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CASD1Q96PB1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CASD1Q96PB1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CASD1Q96PB1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CASD1Q96PB1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CASD1Q96PB1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
CASD1Q96PB1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CASD1Q96PB1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.41■■□□□ 1.18
CASD1Q96PB1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.41■■□□□ 1.18
CASD1Q96PB1 AC008403.3-201ENST00000598924 454 ntBASIC22.41■■□□□ 1.18
CASD1Q96PB1 AL589743.5-201ENST00000616611 1050 ntBASIC22.41■■□□□ 1.18
CASD1Q96PB1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CASD1Q96PB1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CASD1Q96PB1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CASD1Q96PB1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CASD1Q96PB1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.4■■□□□ 1.18
CASD1Q96PB1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CASD1Q96PB1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.4■■□□□ 1.18
CASD1Q96PB1 AC007322.3-201ENST00000426526 701 ntBASIC22.4■■□□□ 1.18
CASD1Q96PB1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CASD1Q96PB1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.4■■□□□ 1.18
CASD1Q96PB1 AC060766.5-201ENST00000590539 871 ntBASIC22.4■■□□□ 1.18
CASD1Q96PB1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.4■■□□□ 1.18
CASD1Q96PB1 HLA-B-256ENST00000639848 1089 ntBASIC22.4■■□□□ 1.18
CASD1Q96PB1 AP006294.2-201ENST00000641667 209 ntBASIC22.4■■□□□ 1.18
CASD1Q96PB1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CASD1Q96PB1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms