Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 MIR4758-201ENST00000577688 71 ntBASIC17.01■□□□□ 0.31
ZNF48Q96MX3 AC120498.10-201ENST00000621827 505 ntBASIC17.01■□□□□ 0.31
ZNF48Q96MX3 OR10C1-204ENST00000622521 1039 ntBASIC17.01■□□□□ 0.31
ZNF48Q96MX3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.01■□□□□ 0.31
ZNF48Q96MX3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF48Q96MX3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17■□□□□ 0.31
ZNF48Q96MX3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF48Q96MX3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
ZNF48Q96MX3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
ZNF48Q96MX3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17■□□□□ 0.31
ZNF48Q96MX3 POU5F1P4-201ENST00000413175 1085 ntBASIC17■□□□□ 0.31
ZNF48Q96MX3 PPP1R14BP2-201ENST00000426284 444 ntBASIC17■□□□□ 0.31
ZNF48Q96MX3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17■□□□□ 0.31
ZNF48Q96MX3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17■□□□□ 0.31
ZNF48Q96MX3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17■□□□□ 0.31
ZNF48Q96MX3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17■□□□□ 0.31
ZNF48Q96MX3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17■□□□□ 0.31
ZNF48Q96MX3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17■□□□□ 0.31
ZNF48Q96MX3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ZNF48Q96MX3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF48Q96MX3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF48Q96MX3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ZNF48Q96MX3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF48Q96MX3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17■□□□□ 0.31
ZNF48Q96MX3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF48Q96MX3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF48Q96MX3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF48Q96MX3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
ZNF48Q96MX3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF48Q96MX3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.99■□□□□ 0.31
ZNF48Q96MX3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF48Q96MX3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF48Q96MX3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF48Q96MX3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF48Q96MX3 AC008694.1-202ENST00000636953 945 ntBASIC16.99■□□□□ 0.31
ZNF48Q96MX3 AC066615.1-201ENST00000640911 628 ntBASIC16.99■□□□□ 0.31
ZNF48Q96MX3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF48Q96MX3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ZNF48Q96MX3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 AC069236.1-201ENST00000604339 616 ntBASIC16.98■□□□□ 0.31
ZNF48Q96MX3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.98■□□□□ 0.31
ZNF48Q96MX3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 AL512625.2-201ENST00000417533 625 ntBASIC16.97■□□□□ 0.31
ZNF48Q96MX3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 FAM201B-201ENST00000458407 597 ntBASIC16.97■□□□□ 0.31
ZNF48Q96MX3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 AC061975.6-201ENST00000579045 1553 ntBASIC16.97■□□□□ 0.31
ZNF48Q96MX3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF48Q96MX3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms