Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.08■■□□□ 1.13
CALR3Q96L12 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.08■■□□□ 1.12
CALR3Q96L12 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.08■■□□□ 1.12
CALR3Q96L12 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CALR3Q96L12 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
CALR3Q96L12 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CALR3Q96L12 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CALR3Q96L12 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CALR3Q96L12 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.08■■□□□ 1.12
CALR3Q96L12 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.07■■□□□ 1.12
CALR3Q96L12 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CALR3Q96L12 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.07■■□□□ 1.12
CALR3Q96L12 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
CALR3Q96L12 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.07■■□□□ 1.12
CALR3Q96L12 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.07■■□□□ 1.12
CALR3Q96L12 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 AC105233.4-201ENST00000642045 216 ntBASIC22.07■■□□□ 1.12
CALR3Q96L12 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CALR3Q96L12 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CALR3Q96L12 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.07■■□□□ 1.12
CALR3Q96L12 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.07■■□□□ 1.12
CALR3Q96L12 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.07■■□□□ 1.12
CALR3Q96L12 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CALR3Q96L12 PLK5-205ENST00000642079 1969 ntBASIC22.07■■□□□ 1.12
CALR3Q96L12 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CALR3Q96L12 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
CALR3Q96L12 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CALR3Q96L12 BX005040.4-201ENST00000637145 1518 ntBASIC22.06■■□□□ 1.12
CALR3Q96L12 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.06■■□□□ 1.12
CALR3Q96L12 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CALR3Q96L12 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
CALR3Q96L12 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.06■■□□□ 1.12
CALR3Q96L12 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CALR3Q96L12 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CALR3Q96L12 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CALR3Q96L12 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.06■■□□□ 1.12
CALR3Q96L12 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CALR3Q96L12 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.06■■□□□ 1.12
CALR3Q96L12 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
CALR3Q96L12 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CALR3Q96L12 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CALR3Q96L12 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CALR3Q96L12 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
CALR3Q96L12 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.05■■□□□ 1.12
CALR3Q96L12 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CALR3Q96L12 AP005212.1-201ENST00000581547 1997 ntBASIC22.05■■□□□ 1.12
CALR3Q96L12 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.05■■□□□ 1.12
CALR3Q96L12 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CALR3Q96L12 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CALR3Q96L12 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.05■■□□□ 1.12
CALR3Q96L12 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CALR3Q96L12 AC027682.1-201ENST00000562846 899 ntBASIC22.05■■□□□ 1.12
CALR3Q96L12 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.05■■□□□ 1.12
CALR3Q96L12 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.05■■□□□ 1.12
CALR3Q96L12 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CALR3Q96L12 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CALR3Q96L12 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.05■■□□□ 1.12
CALR3Q96L12 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.05■■□□□ 1.12
CALR3Q96L12 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.05■■□□□ 1.12
CALR3Q96L12 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
CALR3Q96L12 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CALR3Q96L12 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CALR3Q96L12 AL391422.3-201ENST00000603791 2761 ntBASIC22.04■■□□□ 1.12
CALR3Q96L12 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.04■■□□□ 1.12
CALR3Q96L12 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.04■■□□□ 1.12
CALR3Q96L12 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.04■■□□□ 1.12
CALR3Q96L12 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.04■■□□□ 1.12
CALR3Q96L12 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CALR3Q96L12 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.04■■□□□ 1.12
CALR3Q96L12 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CALR3Q96L12 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CALR3Q96L12 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CALR3Q96L12 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
CALR3Q96L12 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CALR3Q96L12 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.04■■□□□ 1.12
CALR3Q96L12 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CALR3Q96L12 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CALR3Q96L12 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CALR3Q96L12 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CALR3Q96L12 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CALR3Q96L12 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.03■■□□□ 1.12
CALR3Q96L12 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.03■■□□□ 1.12
CALR3Q96L12 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CALR3Q96L12 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CALR3Q96L12 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.03■■□□□ 1.12
CALR3Q96L12 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.03■■□□□ 1.12
CALR3Q96L12 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms