Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.99■□□□□ 0.95
ECHDC3Q96DC8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 AC245052.3-201ENST00000450182 901 ntBASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC3Q96DC8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC3Q96DC8 AC068338.2-201ENST00000563278 1430 ntBASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 AL050303.2-201ENST00000619798 666 ntBASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC3Q96DC8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ECHDC3Q96DC8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 MIR663A-201ENST00000385250 93 ntBASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 AC091799.1-201ENST00000422823 811 ntBASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 AL162412.1-201ENST00000567129 965 ntBASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 AC005181.1-201ENST00000604782 1256 ntBASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ECHDC3Q96DC8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC3Q96DC8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms