Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.9■■□□□ 1.1
RNF25Q96BH1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF25Q96BH1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF25Q96BH1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF25Q96BH1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF25Q96BH1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF25Q96BH1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF25Q96BH1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF25Q96BH1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF25Q96BH1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF25Q96BH1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF25Q96BH1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.89■■□□□ 1.1
RNF25Q96BH1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
RNF25Q96BH1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RNF25Q96BH1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.89■■□□□ 1.1
RNF25Q96BH1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF25Q96BH1 AC017007.3-201ENST00000479865 435 ntBASIC21.89■■□□□ 1.09
RNF25Q96BH1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF25Q96BH1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF25Q96BH1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF25Q96BH1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF25Q96BH1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF25Q96BH1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF25Q96BH1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF25Q96BH1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF25Q96BH1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF25Q96BH1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.88■■□□□ 1.09
RNF25Q96BH1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 LINC01006-201ENST00000333319 2292 ntBASIC21.88■■□□□ 1.09
RNF25Q96BH1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF25Q96BH1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RNF25Q96BH1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 AL121603.2-201ENST00000557373 2117 ntBASIC21.88■■□□□ 1.09
RNF25Q96BH1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF25Q96BH1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF25Q96BH1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF25Q96BH1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
RNF25Q96BH1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF25Q96BH1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF25Q96BH1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF25Q96BH1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF25Q96BH1 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF25Q96BH1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF25Q96BH1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF25Q96BH1 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF25Q96BH1 AC012414.1-201ENST00000556676 535 ntBASIC21.87■■□□□ 1.09
RNF25Q96BH1 AC142381.2-201ENST00000566120 298 ntBASIC21.87■■□□□ 1.09
RNF25Q96BH1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF25Q96BH1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF25Q96BH1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF25Q96BH1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF25Q96BH1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF25Q96BH1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF25Q96BH1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF25Q96BH1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RNF25Q96BH1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF25Q96BH1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF25Q96BH1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RNF25Q96BH1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
RNF25Q96BH1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF25Q96BH1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF25Q96BH1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF25Q96BH1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF25Q96BH1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF25Q96BH1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF25Q96BH1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF25Q96BH1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF25Q96BH1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RNF25Q96BH1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF25Q96BH1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF25Q96BH1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF25Q96BH1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF25Q96BH1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
RNF25Q96BH1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF25Q96BH1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF25Q96BH1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF25Q96BH1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
RNF25Q96BH1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF25Q96BH1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF25Q96BH1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF25Q96BH1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RNF25Q96BH1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF25Q96BH1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF25Q96BH1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF25Q96BH1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF25Q96BH1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF25Q96BH1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF25Q96BH1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms