Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN23Q96B33 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CLDN23Q96B33 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.1■□□□□ 0.97
CLDN23Q96B33 AC139530.1-201ENST00000575312 1977 ntBASIC21.1■□□□□ 0.97
CLDN23Q96B33 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN23Q96B33 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN23Q96B33 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN23Q96B33 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN23Q96B33 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN23Q96B33 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CLDN23Q96B33 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN23Q96B33 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.09■□□□□ 0.97
CLDN23Q96B33 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.09■□□□□ 0.97
CLDN23Q96B33 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.09■□□□□ 0.97
CLDN23Q96B33 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.09■□□□□ 0.97
CLDN23Q96B33 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN23Q96B33 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN23Q96B33 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.09■□□□□ 0.97
CLDN23Q96B33 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN23Q96B33 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN23Q96B33 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN23Q96B33 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN23Q96B33 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN23Q96B33 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN23Q96B33 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.08■□□□□ 0.97
CLDN23Q96B33 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN23Q96B33 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.08■□□□□ 0.97
CLDN23Q96B33 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.97
CLDN23Q96B33 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLDN23Q96B33 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.08■□□□□ 0.96
CLDN23Q96B33 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLDN23Q96B33 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLDN23Q96B33 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLDN23Q96B33 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN23Q96B33 KRT17P2-201ENST00000300992 1314 ntBASIC21.07■□□□□ 0.96
CLDN23Q96B33 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CLDN23Q96B33 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.07■□□□□ 0.96
CLDN23Q96B33 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
CLDN23Q96B33 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN23Q96B33 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN23Q96B33 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLDN23Q96B33 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN23Q96B33 RPS2P55-201ENST00000397318 883 ntBASIC21.07■□□□□ 0.96
CLDN23Q96B33 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.07■□□□□ 0.96
CLDN23Q96B33 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN23Q96B33 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.07■□□□□ 0.96
CLDN23Q96B33 AC107956.1-201ENST00000494359 873 ntBASIC21.07■□□□□ 0.96
CLDN23Q96B33 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN23Q96B33 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.07■□□□□ 0.96
CLDN23Q96B33 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
CLDN23Q96B33 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.07■□□□□ 0.96
CLDN23Q96B33 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLDN23Q96B33 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN23Q96B33 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN23Q96B33 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN23Q96B33 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.06■□□□□ 0.96
CLDN23Q96B33 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.06■□□□□ 0.96
CLDN23Q96B33 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CLDN23Q96B33 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN23Q96B33 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN23Q96B33 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.06■□□□□ 0.96
CLDN23Q96B33 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.06■□□□□ 0.96
CLDN23Q96B33 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.06■□□□□ 0.96
CLDN23Q96B33 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CLDN23Q96B33 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.06■□□□□ 0.96
CLDN23Q96B33 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN23Q96B33 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.06■□□□□ 0.96
CLDN23Q96B33 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN23Q96B33 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN23Q96B33 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.05■□□□□ 0.96
CLDN23Q96B33 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN23Q96B33 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.05■□□□□ 0.96
CLDN23Q96B33 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.05■□□□□ 0.96
CLDN23Q96B33 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.05■□□□□ 0.96
CLDN23Q96B33 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.04■□□□□ 0.96
CLDN23Q96B33 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.04■□□□□ 0.96
CLDN23Q96B33 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.04■□□□□ 0.96
CLDN23Q96B33 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.04■□□□□ 0.96
CLDN23Q96B33 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 KRT18P21-201ENST00000515767 1272 ntBASIC21.04■□□□□ 0.96
CLDN23Q96B33 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.04■□□□□ 0.96
CLDN23Q96B33 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.04■□□□□ 0.96
CLDN23Q96B33 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN23Q96B33 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.04■□□□□ 0.96
CLDN23Q96B33 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.04■□□□□ 0.96
CLDN23Q96B33 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN23Q96B33 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
CLDN23Q96B33 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms