Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.78■□□□□ 0.92
CKAP2Q8WWK9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CKAP2Q8WWK9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CKAP2Q8WWK9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CKAP2Q8WWK9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CKAP2Q8WWK9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.78■□□□□ 0.92
CKAP2Q8WWK9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 pRNA.6-201ENST00000610482 90 ntBASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 pRNA.5-201ENST00000612139 90 ntBASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 pRNA.11-201ENST00000618423 90 ntBASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 pRNA.13-201ENST00000619112 90 ntBASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CKAP2Q8WWK9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.77■□□□□ 0.91
CKAP2Q8WWK9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CKAP2Q8WWK9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CKAP2Q8WWK9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.76■□□□□ 0.91
CKAP2Q8WWK9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CKAP2Q8WWK9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CKAP2Q8WWK9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CKAP2Q8WWK9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
CKAP2Q8WWK9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CKAP2Q8WWK9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.75■□□□□ 0.91
CKAP2Q8WWK9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CKAP2Q8WWK9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CKAP2Q8WWK9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CKAP2Q8WWK9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 AC006455.2-201ENST00000429931 906 ntBASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 MTDHP2-201ENST00000601468 714 ntBASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CKAP2Q8WWK9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CKAP2Q8WWK9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 OR2I1P-207ENST00000453522 948 ntBASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.72■□□□□ 0.91
CKAP2Q8WWK9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CKAP2Q8WWK9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms