Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
PRUNE2Q8WUY3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PRUNE2Q8WUY3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.14■■□□□ 1.13
PRUNE2Q8WUY3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 LINC01960-201ENST00000563759 1884 ntBASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 AP006587.3-201ENST00000525742 1516 ntBASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.13■■□□□ 1.13
PRUNE2Q8WUY3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 AC133681.1-201ENST00000465482 601 ntBASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 KRT16P2-201ENST00000414673 1423 ntBASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PRUNE2Q8WUY3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PRUNE2Q8WUY3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PRUNE2Q8WUY3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PRUNE2Q8WUY3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
PRUNE2Q8WUY3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.11■■□□□ 1.13
PRUNE2Q8WUY3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.11■■□□□ 1.13
PRUNE2Q8WUY3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.11■■□□□ 1.13
PRUNE2Q8WUY3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PRUNE2Q8WUY3 OR7E47P-201ENST00000546390 1422 ntBASIC22.11■■□□□ 1.13
PRUNE2Q8WUY3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PRUNE2Q8WUY3 TERF1P1-201ENST00000311003 1181 ntBASIC22.09■■□□□ 1.13
PRUNE2Q8WUY3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PRUNE2Q8WUY3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.09■■□□□ 1.13
PRUNE2Q8WUY3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PRUNE2Q8WUY3 AC053503.5-201ENST00000601508 636 ntBASIC22.09■■□□□ 1.13
PRUNE2Q8WUY3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.09■■□□□ 1.13
PRUNE2Q8WUY3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.09■■□□□ 1.13
PRUNE2Q8WUY3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.09■■□□□ 1.13
PRUNE2Q8WUY3 AC113410.3-201ENST00000623366 203 ntBASIC22.09■■□□□ 1.13
PRUNE2Q8WUY3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PRUNE2Q8WUY3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.09■■□□□ 1.13
PRUNE2Q8WUY3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PRUNE2Q8WUY3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PRUNE2Q8WUY3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PRUNE2Q8WUY3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PRUNE2Q8WUY3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.08■■□□□ 1.13
PRUNE2Q8WUY3 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.08■■□□□ 1.13
PRUNE2Q8WUY3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.08■■□□□ 1.13
PRUNE2Q8WUY3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
PRUNE2Q8WUY3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
PRUNE2Q8WUY3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.08■■□□□ 1.13
PRUNE2Q8WUY3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.08■■□□□ 1.13
PRUNE2Q8WUY3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.08■■□□□ 1.13
PRUNE2Q8WUY3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.08■■□□□ 1.13
PRUNE2Q8WUY3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PRUNE2Q8WUY3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.08■■□□□ 1.12
PRUNE2Q8WUY3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PRUNE2Q8WUY3 CRYGFP-201ENST00000418459 633 ntBASIC22.08■■□□□ 1.12
PRUNE2Q8WUY3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.08■■□□□ 1.12
PRUNE2Q8WUY3 KRT126P-201ENST00000549467 1181 ntBASIC22.08■■□□□ 1.12
PRUNE2Q8WUY3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.08■■□□□ 1.12
PRUNE2Q8WUY3 AC026471.5-201ENST00000615068 467 ntBASIC22.08■■□□□ 1.12
PRUNE2Q8WUY3 AC100791.3-201ENST00000617619 330 ntBASIC22.08■■□□□ 1.12
PRUNE2Q8WUY3 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.08■■□□□ 1.12
PRUNE2Q8WUY3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.07■■□□□ 1.12
PRUNE2Q8WUY3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PRUNE2Q8WUY3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.07■■□□□ 1.12
PRUNE2Q8WUY3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.07■■□□□ 1.12
PRUNE2Q8WUY3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PRUNE2Q8WUY3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PRUNE2Q8WUY3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
PRUNE2Q8WUY3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms